PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc017237.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 169aa MW: 19279.1 Da PI: 9.5261 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24 | 6.8e-08 | 62 | 89 | 3 | 30 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 r+h e+ErrRR+riN ++ L +l+P Cse_sc017237.1_g020.1 62 RNHGEAERRRRERINGHLSMLSSLVPGT 89 5799**********************74 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MMILSHVRTT SSSSSVVLDN EKGEIVRAFV TPGNIRHTLH DDHDHENCQK DAKGEKAIMA 60 LRNHGEAERR RRERINGHLS MLSSLVPGTT KLLISSRAFT ISPLERRGIV NRARPWLWAA 120 WANARGIKQV SEDIETVNHI FFSCEMAKDL WALLARRWEL DIPICSNFL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 73 | ERRRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 9e-07 | bHLH family protein |