PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017011.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 314aa MW: 35148.9 Da PI: 9.7298

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017011.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	53.6	6e-17	18	108	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfd 83 +Wt++e l+Liea+re++ +l r+ l+ p+W++v++k+ + +++ qC++k+e+l++r++++k+++ + + s++ yf+ Cse_sc017011.1_g040.1 18 CWTRDEALVLIEAYRERWYALHRAFLRNPDWDAVAEKVttacPDVTPPKTSAQCRHKMEKLRQRHRAEKQRAASFpGGRFFSSWFYFE 105 8***********************************8877778889999********************984467778999999 PP trihelix 84 qle 86 +e Cse_sc017011.1_g040.1 106 AME 108 997 PP

Sequence ? help Back to Top
Protein Sequence Length: 314 aa Download sequence
MSTTVATVKP TRKFPPPCWT RDEALVLIEA YRERWYALHR AFLRNPDWDA VAEKVTTACP 60 DVTPPKTSAQ CRHKMEKLRQ RHRAEKQRAA SFPGGRFFSS WFYFEAMETL ENGPGSEPGS 120 GPNDPNTNPG LNPGRGIRFK PSGVGNNLVT LAANNAYVNN WGSQEGGDDD GTNPYNNSGY 180 VGGIRAKPVI PVAARKVRKV DEEGEMWVKM PRETNAYQGT NVNESYNAGL KQGMKRGETG 240 IDDVVASIKM LGDGFMKMEK MKLDMAREIE RMRMESEMKR NQLILESQKQ IVDAFVKGLV 300 ETKKRPRGET VADS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	2e-36	Trihelix family protein