PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016858.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 872aa MW: 98063.4 Da PI: 7.396

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016858.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	82.9	3.5e-26	182	235	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt+e+H++F++a++qL G++k+ Pk+i+elm+v+gLt+e+v+SHLQkYR+ Cse_sc016858.1_g030.1 182 KPRVVWTKEMHQKFLDAIAQL-GHDKTFPKKIVELMNVPGLTRENVASHLQKYRM 235 79*****************.******************************7 PP
2	Myb_DNA-binding	37.2	6.6e-12	184	234	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r WT+e +++++da++qlG + +k+I + m+ g+t++++ s++qky+ Cse_sc016858.1_g030.1 184 RVVWTKEMHQKFLDAIAQLGHDktFPKKIVELMNvPGLTRENVASHLQKYR 234 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 872 aa Download sequence
ILTGYKPIPK ATYPNTLINS LDPLTVPFTV KNIRCSRTKE DSLEIYLGRV RQFCRLDTRK 60 HVADQSMMRC QREMDALNII REKKDMIELI LTNAHRTYGN RDGMIDHIEK QFKLQIILMS 120 PDVDEMINAS RIGGKVTVKE LNKLWATAMA REKSKQELSC VENEGSKRTR ENDEQNGDVE 180 KKPRVVWTKE MHQKFLDAIA QLGHDKTFPK KIVELMNVPG LTRENVASHL QKYRMCMKRA 240 QEGFTDSSYD VTDPFTFNYS QRNFQQSYWN PFQTRFRNTT TSHFNLNSYN IRPKMAQHES 300 LLNTIRFKPY HNFRVYGDER KNVLLSINDS KVRSNTSFAG FRLTGDGKSV MFGENCHIGI 360 RSVNESCIPS PIASSLNQRF SYPELGNDDS SHCLSSVVSP GTGLGEPVRF SSQMSSLAAL 420 LGVDEPISAI LNELQPSATS PGLDWNKAAS FTSQQPTIMT QMQPFEGFQV TECNDAASFT 480 CQQPTIMTQM QPSEVQQVTE CNDAASFTQP QSAGLQGIDW AEPLIFSPQQ TPSGNDANAS 540 SEIFSDFTST CLSPEFYEPG MAGDDNNKPK TRPPRRITKI KIKEPDDYHA TLKALNSKGR 600 MPRKALGQHY MLNGEVNDKL VDAANVGDGD VVLEIGPGTG SLTNVLVESG ANVLAIEKDP 660 YMAALVTDRF ASTQRVKVIQ EDFTRCHLRS HLSSYMGSVS SDSTPYAKVV ANIPFNISTD 720 VVKQLLPMGD IFSEVVLLLQ DEAALRMVDP SLRTHEYRPI NIFINFYSDP EYIFKVPRAN 780 FFPQPKVDAA VVVFRLKQAV DYPKVSSTRS FFSMINSAFN GKRKMLRKTL QHIAPSLEIE 840 EALVNVGLAA TSRPEELTLE DFVKLHNLIV DT

Sequence ? help Back to Top

Protein Sequence Length: 872 aa Download sequence

ILTGYKPIPK ATYPNTLINS LDPLTVPFTV KNIRCSRTKE DSLEIYLGRV RQFCRLDTRK  60
HVADQSMMRC QREMDALNII REKKDMIELI LTNAHRTYGN RDGMIDHIEK QFKLQIILMS  120
PDVDEMINAS RIGGKVTVKE LNKLWATAMA REKSKQELSC VENEGSKRTR ENDEQNGDVE  180
KKPRVVWTKE MHQKFLDAIA QLGHDKTFPK KIVELMNVPG LTRENVASHL QKYRMCMKRA  240
QEGFTDSSYD VTDPFTFNYS QRNFQQSYWN PFQTRFRNTT TSHFNLNSYN IRPKMAQHES  300
LLNTIRFKPY HNFRVYGDER KNVLLSINDS KVRSNTSFAG FRLTGDGKSV MFGENCHIGI  360
RSVNESCIPS PIASSLNQRF SYPELGNDDS SHCLSSVVSP GTGLGEPVRF SSQMSSLAAL  420
LGVDEPISAI LNELQPSATS PGLDWNKAAS FTSQQPTIMT QMQPFEGFQV TECNDAASFT  480
CQQPTIMTQM QPSEVQQVTE CNDAASFTQP QSAGLQGIDW AEPLIFSPQQ TPSGNDANAS  540
SEIFSDFTST CLSPEFYEPG MAGDDNNKPK TRPPRRITKI KIKEPDDYHA TLKALNSKGR  600
MPRKALGQHY MLNGEVNDKL VDAANVGDGD VVLEIGPGTG SLTNVLVESG ANVLAIEKDP  660
YMAALVTDRF ASTQRVKVIQ EDFTRCHLRS HLSSYMGSVS SDSTPYAKVV ANIPFNISTD  720
VVKQLLPMGD IFSEVVLLLQ DEAALRMVDP SLRTHEYRPI NIFINFYSDP EYIFKVPRAN  780
FFPQPKVDAA VVVFRLKQAV DYPKVSSTRS FFSMINSAFN GKRKMLRKTL QHIAPSLEIE  840
EALVNVGLAA TSRPEELTLE DFVKLHNLIV DT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	5e-29	ARR-B family protein