PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016732.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 323aa MW: 36458.1 Da PI: 9.5768

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016732.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	130.2	7.7e-41	128	203	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv+gC++ ls++key+rrhkvCe+hskap+v+v gl+qrfCqqCsrfh +sefD++krsCrrrL++hn+rrrk Cse_sc016732.1_g020.1 128 RCQVDGCHVALSNVKEYYRRHKVCEIHSKAPKVVVLGLQQRFCQQCSRFHVMSEFDDAKRSCRRRLEGHNQRRRKG 203 6*************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 323 aa Download sequence
MESSGWRKCL ASIDNGGNDM RVHNNSNLAN DAWDNTNIIS TNTSTSTTPI FAASGTPYYD 60 YTNQILFNNN NNNNHCIRDP HMMCLRLGKR HYCSDTVVVP GRYMAAESSS AANKRPGKQP 120 FPYAMAARCQ VDGCHVALSN VKEYYRRHKV CEIHSKAPKV VVLGLQQRFC QQCSRFHVMS 180 EFDDAKRSCR RRLEGHNQRR RKGTISNSNT LPRNFPHSHE NHPMMERQLR PLSRLPSPPH 240 SKPGYALSLL SSPNLEPWMN SSGDLSSRCS AALYELIAAN RATNLAGNLL NQNTSHQTVI 300 ETTVQTLPNT QMWIDSMMHV TRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27370.3	3e-35	SBP family protein