PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016713.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 314aa    MW: 35574.9 Da    PI: 6.1325
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016713.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.19e-29118177258
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58 
                            +Dgy+WrKYGqK++ g+++pr+YYrCt++   gC ++k+v+rs+ed +v+e+tY+g+H++
  Cse_sc016713.1_g010.1 118 SDGYSWRKYGQKDILGANHPRAYYRCTHRnvqGCLATKQVQRSDEDSSVFEVTYRGRHTC 177
                            7***************************98999*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
METGQKRPLI NELTQGKEFT YQLKNHLDKP MSVETCEYLV EKILNSYENA ISMLTRASAI  60
QETPTFDEIS PSIQVSEPED SNSPHNSHKN VFKKRKTMAK WSEQVKVCSG SMVEGPLSDG  120
YSWRKYGQKD ILGANHPRAY YRCTHRNVQG CLATKQVQRS DEDSSVFEVT YRGRHTCIHA  180
TQLSKALAKK PKKEEETIHD IKMTQKICLD RVFSFKTSKG VTTMEEGLFP SFSFASTPIE  240
TEKLENLFHL GCDSTTFVAF NHTLQSSDSD LSEIMNSTPN SVTNSPLADW DVSLDHVDIN  300
GNFLFDITDS EMFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.13e-44WRKY family protein