PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016603.1_g070.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 116aa    MW: 13555.5 Da    PI: 9.6571
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016603.1_g070.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.36.3e-123677346
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                           ++T+eEde l ++vk +  + W++ ++ ++ gR++k c++rw +
  Cse_sc016603.1_g070.1 36 SFTPEEDEMLQNLVKNHSRN-WSLTSNSIP-GRSAKTCRLRWET 77
                           79***************966.*********.***********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MYVKVVFNLL VIYASGGQDG KSDKTCELRW FSLQKSFTPE EDEMLQNLVK NHSRNWSLTS  60
NSIPGRSAKT CRLRWETVWN PLQIRKDIEN RWNSTLKGKS ISMTNEDITI LNFEKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23290.17e-14MYB family protein