PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016371.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 433aa    MW: 48672.3 Da    PI: 4.2084
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016371.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.9e-08232280247
                            SSS-HHHHHHHHHHHH....HTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   2 grWTteEdellvdavk....qlGggtWktIartmgkgRtlkqcksrwqky 47 
                             +W++eE++l+ d+v      +G++ W+  +  ++  Rt k+++s+++++
  Cse_sc016371.1_g030.1 232 SNWSEEEEQLFQDVVYsnpvSHGKRFWEQLSIAFP-SRTKKEIVSYYFNV 280
                            58*************7233368999**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MGTKRPFDED LQEFIKHPRH IDNGNKPDYF GEDKHLYETS QNGEIAGEGE TNFFQTGDIS  60
DKVAAEPDMV DKAFEASDPL PLVTGISGRE EACGLGPVFF PNIFPEFFEV NMPRRQLVHY  120
DDTYSSLLNI PPRKEVPVGP EYQADVPEFD SESAKSYISD NGGEHSFMSI CVISEQEGEI  180
ITAQAECSCL DSGSIRCVQQ HVSEARLNLK ECLGHEIFVE LGFDNMGEEV SSNWSEEEEQ  240
LFQDVVYSNP VSHGKRFWEQ LSIAFPSRTK KEIVSYYFNV FILRRRAVQN RSHLLAIDSD  300
DDEWWGPKRE SSGATIEDED FHVVEPFADH QGHDFASEAG DEINGAEGDD LRQTNEGSST  360
IIHDEKVVTN ENEQEKPLNL NKQEANNSGV RSESYLHWDP PYSTMGPTKG VDLLPTCSMI  420
EEIFGSSKTS KGT