PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016122.1_g020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 178aa    MW: 20387.4 Da    PI: 6.0159
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016122.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.31e-30115173159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDg++WrKYG+K+vk+s++pr+YYrC+ +gC+vkk+ver+ +d ++v++tYeg Hnh+
  Cse_sc016122.1_g020.1 115 LDDGFKWRKYGKKMVKNSPNPRNYYRCSAEGCSVKKRVERDVDDARYVITTYEGVHNHQ 173
                            59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MDAYDPMSNE SYGYRSVGSP DIDYDVPHQQ NSEFFDNFFV LDEWMHEDQA SIVPEYQDHT  60
LAYAPTVFDD GSPSMGSSSS PLQGNSNVGG TVMRQAQKAR KEKVAFRTKS QVEVLDDGFK  120
WRKYGKKMVK NSPNPRNYYR CSAEGCSVKK RVERDVDDAR YVITTYEGVH NHQRPSNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.14e-40WRKY family protein