PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015860.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 278aa MW: 31655.2 Da PI: 5.2414 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.7 | 2e-18 | 67 | 120 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++++LA+ lgL+ rqV +WFqNrRa++k Cse_sc015860.1_g020.1 67 KKRRLNLEQVKALEKSFELGNKLEPERKTQLARALGLQPRQVAIWFQNRRARWK 120 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 128.4 | 2.9e-41 | 66 | 156 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 ekkrrl+ eqvk+LE+sFe +kLeperK++lar+Lglqprqva+WFqnrRAR+ktkqlEkdy++Lkr+++++k++n++L++ +++L+ Cse_sc015860.1_g020.1 66 EKKRRLNLEQVKALEKSFELGNKLEPERKTQLARALGLQPRQVAIWFQNRRARWKTKQLEKDYDVLKRQFESVKADNDALKNLNKKLH 153 69************************************************************************************** PP HD-ZIP_I/II 89 eel 91 +el Cse_sc015860.1_g020.1 154 AEL 156 998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MSFLPPEPMF FGYEDDHHPP HEQYQGVGTL LMRRSMSYSG MDRCEETRGN AADEDLSEDD 60 GSQLGEKKRR LNLEQVKALE KSFELGNKLE PERKTQLARA LGLQPRQVAI WFQNRRARWK 120 TKQLEKDYDV LKRQFESVKA DNDALKNLNK KLHAELLAVK GGESNGVRPI NLNKETEGSW 180 SNGSENSCDL NTVTGTMTPS EESPIFYTQI SNNMYPNMSS IGPNSSLTQL LQNQATTDLL 240 SQRLNQSVGN EGFCNMFNGI EDQPSFWPWP EQHSQHLN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 123 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 2e-72 | HD-ZIP family protein |