PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015801.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | ERF | ||||||||
Protein Properties | Length: 193aa MW: 21794.8 Da PI: 6.6009 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 50.2 | 6.3e-16 | 46 | 96 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr +k g+Wv+e+r+p + r++lg+++ta++Aa+a++ a ++++g Cse_sc015801.1_g010.1 46 PVYRGVRSRK-FGKWVCEVRHPI----TqSRVWLGTHDTADMAARAHDVAVLAMRG 96 68*****888.9*********72....46*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MDIESHYQHQ EKLSHVQPSL EPELMLASQN PKKRAGRKKF KETRHPVYRG VRSRKFGKWV 60 CEVRHPITQS RVWLGTHDTA DMAARAHDVA VLAMRGRSAC LNFADSVWRL PIPQSSDVID 120 IQKAAAEAAK SFRPIVEIVN IVYEVDEDEI FGMPGVIDSM AEGLMLPSPH TVGHGNIFDD 180 VESFDDMSLW CSN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25470.1 | 1e-64 | ERF family protein |