PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015736.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 338aa MW: 38036.6 Da PI: 7.2811

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015736.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.8	2e-32	65	123	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK vkg+++prsYY+Ct+a+C+v+k+ver+++d+kvv++tYeg+H+h+ Cse_sc015736.1_g030.1 65 VNDGYRWRKYGQKLVKGNPNPRSYYKCTYARCQVRKHVERASHDEKVVITTYEGRHDHK 123 58********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MVAPSEISVE VEVTQSNDIE SEAISIPPYS KRRKKEGACV NDTVATETNY EPRVVVATTS 60 PVDIVNDGYR WRKYGQKLVK GNPNPRSYYK CTYARCQVRK HVERASHDEK VVITTYEGRH 120 DHKMPSGIRT GTINTQGNNN YTTSRFEKVV TTIYDGRHAH KMPSRIRTGA INTQGNNNCT 180 TSSFEKVVAT IYEGRHDHEM PSGIRTVTLN TQGNNTGTSS SDCDARAQPI VNKYTAGMSR 240 YFPPRNEKLV QVEGVNPPDE KKELEEKVDD LEHRLQEVPM DKDQTLNLEE VKCLEAEKTK 300 LANSTPEICY ECYKLLVSPD LLVPHGKFQD QAICLGGH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G26640.1	2e-40	WRKY family protein