PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015614.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 464aa MW: 51215.4 Da PI: 7.0305

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015614.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.6	1.7e-30	234	292	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +v+++tYeg+Hnh+ Cse_sc015614.1_g010.1 234 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTVLTTTYEGTHNHP 292 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSIMEARCEN MVLNSFDGHK FPITRHENES SKIDEMDFFS RSSSASLKNP LSIDVKEEEQ 60 QDGAHQELQL NLNVGLSPTT TNGASINVGS PSTNDQTTHK MAILQAQLEK MKRENEGLRS 120 MVSQVKEKYV FLQKHIQENI ISHETSENIK MNEVAVKEDT KQSLLVPLEF NNLNQITKLE 180 VDNNMTKIDS SVDSPYNKDL KFNSPRDGDR VAVEATMRRA RVSVRARSEA SMISDGCQWR 240 KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTV LTTTYEGTHN HPLPQAATAM 300 ASTTSAAASM LLSGSISSSN NLNHHLTSGS MLSSYPPNIT TSLSSTAPFP TITLDLTNPS 360 ANHHIPQPPF HFPFSTNMLP NINLPNRPLV LGQLSSQHYN ATKFSDVQSS EQELMNAATA 420 AVTADPNFMA ALVAAIGSII GNDVKRDTGG SKNENDNNNY FTRN

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSIMEARCEN MVLNSFDGHK FPITRHENES SKIDEMDFFS RSSSASLKNP LSIDVKEEEQ  60
QDGAHQELQL NLNVGLSPTT TNGASINVGS PSTNDQTTHK MAILQAQLEK MKRENEGLRS  120
MVSQVKEKYV FLQKHIQENI ISHETSENIK MNEVAVKEDT KQSLLVPLEF NNLNQITKLE  180
VDNNMTKIDS SVDSPYNKDL KFNSPRDGDR VAVEATMRRA RVSVRARSEA SMISDGCQWR  240
KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTV LTTTYEGTHN HPLPQAATAM  300
ASTTSAAASM LLSGSISSSN NLNHHLTSGS MLSSYPPNIT TSLSSTAPFP TITLDLTNPS  360
ANHHIPQPPF HFPFSTNMLP NINLPNRPLV LGQLSSQHYN ATKFSDVQSS EQELMNAATA  420
AVTADPNFMA ALVAAIGSII GNDVKRDTGG SKNENDNNNY FTRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	4e-62	WRKY family protein