PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015552.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 224aa MW: 24965.1 Da PI: 4.588 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 91.1 | 8.6e-29 | 133 | 191 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YY+C+++ C ++k+ve+s++d +++++ Y+geH h+ Cse_sc015552.1_g030.1 133 NDTWAWRKYGQKPIKGSPYPRNYYKCSTTkACGARKQVEQSNTDSTIFIVSYSGEHIHP 191 7*************************99889***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MDDEWDLHAV VRSCNTISND ANATSGTNTT TNVEEFDDDF DNMEGLASEN DMNLFSYSNS 60 SENPLEGLEE VYKEGCSQPL TTNTVVVSFD DEQQLVTDAG SSSFTIETPT SRKRKNQQKK 120 VVVELTQEEL SNNDTWAWRK YGQKPIKGSP YPRNYYKCST TKACGARKQV EQSNTDSTIF 180 IVSYSGEHIH PRPTHRSPLA GSTRSNKFAT GNVPPISEDN TTHS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52830.1 | 2e-40 | WRKY family protein |