PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015409.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 457aa MW: 50690.2 Da PI: 6.6182

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015409.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.5	1.9e-07	371	404	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Cse_sc015409.1_g030.1 371 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 404 569*****************************87 PP
2	ELK	28.7	3e-10	325	346	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Cse_sc015409.1_g030.1 325 ELKHELKQGYKEKIVDIREEIL 346 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MAFHPNNNNN HLSQDMSQQQ QHFTDTDNNS NSVLRTMMPA GKDHWLNSAI MRQQGAGAQF 60 GGAGGNNFLN LQTSNESESG GGNGNNQWLS RNMMQRGGGG GGDEMVSSDS IMAAAAMSSP 120 ELNNQSRNMV DNNGGGELGD SEVGGGDGSG DGAMNWQNAR YKADVLSHPL YEQLLSAHVS 180 CLRIATPVDQ LPRIDAQLAQ SQHVVSKYSG LGGHGNLGDD KELDQFMTHY VLLLCSFKEQ 240 LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGTGATMS DDEEDQVESD ANLYDGSLDG 300 HDSMGFGPLV PTESERSLME RVRQELKHEL KQGYKEKIVD IREEILRKRR AGKLPGDTTS 360 VLKSWWQSHA KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHSNP SSSTVLKSKR 420 KRYYILINFI KKNLRKRSTN TITKRSNAGD KGSDHNM

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MAFHPNNNNN HLSQDMSQQQ QHFTDTDNNS NSVLRTMMPA GKDHWLNSAI MRQQGAGAQF  60
GGAGGNNFLN LQTSNESESG GGNGNNQWLS RNMMQRGGGG GGDEMVSSDS IMAAAAMSSP  120
ELNNQSRNMV DNNGGGELGD SEVGGGDGSG DGAMNWQNAR YKADVLSHPL YEQLLSAHVS  180
CLRIATPVDQ LPRIDAQLAQ SQHVVSKYSG LGGHGNLGDD KELDQFMTHY VLLLCSFKEQ  240
LQQHVRVHAM EAVMACWEIE QSLQSLTGVS PGEGTGATMS DDEEDQVESD ANLYDGSLDG  300
HDSMGFGPLV PTESERSLME RVRQELKHEL KQGYKEKIVD IREEILRKRR AGKLPGDTTS  360
VLKSWWQSHA KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHSNP SSSTVLKSKR  420
KRYYILINFI KKNLRKRSTN TITKRSNAGD KGSDHNM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	402	422	RKRNWHSNPSSSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein