PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015331.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 480aa MW: 53212.7 Da PI: 4.3805

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015331.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113	2e-35	36	127	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl k+y++++d+++++++sws+++nsf+v d+ efak +LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g Cse_sc015331.1_g030.1 36 FLVKTYDMVDDPSTDNVVSWSSTNNSFIVRDPPEFAKFLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRG 114 9**************************************************************999.........******* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 +k+ll++i r+k Cse_sc015331.1_g030.1 115 QKHLLKTIVRRKP 127 ********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MDPNPQPSNA PTPTTPPPVP PPVPIPMATT NAPPPFLVKT YDMVDDPSTD NVVSWSSTNN 60 SFIVRDPPEF AKFLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK 120 TIVRRKPASG HAQQSHPPHP QTSSVGACVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ 180 QQTTDNQMQS MVQRLQGMEQ RQQQMMSFLA KAVNSPGFLS HFVQHQNETS KLIKEGSKKR 240 RLKQDGVVSN GHNESPDSQI VKYQPMITLG NSSPPSETFS EGSGQGVTVQ GQLILPEVTG 300 DQSAPLEANS DVVATSPLSK VQELPYISDD LDMVSNDAFI GPNMVPSDIE VVATTPLADG 360 QELPYIPDDL DMVPNDAFIG PDVIPSDIEK FLLNPDEEWN SNLLVEMDKF IAGLDPSCDQ 420 LLQPNPEIDD TTQEMDSVPP VDDYLMQGSE DKPLENASPT GQVQQLTQQM GLLSSQTKEA

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MDPNPQPSNA PTPTTPPPVP PPVPIPMATT NAPPPFLVKT YDMVDDPSTD NVVSWSSTNN  60
SFIVRDPPEF AKFLLPKYFK HNNFSSFVRQ LNTYGFRKVD PDRWEFANEG FLRGQKHLLK  120
TIVRRKPASG HAQQSHPPHP QTSSVGACVE VGKFGLEEEV ERLKRDKNVL MQELVRLRQQ  180
QQTTDNQMQS MVQRLQGMEQ RQQQMMSFLA KAVNSPGFLS HFVQHQNETS KLIKEGSKKR  240
RLKQDGVVSN GHNESPDSQI VKYQPMITLG NSSPPSETFS EGSGQGVTVQ GQLILPEVTG  300
DQSAPLEANS DVVATSPLSK VQELPYISDD LDMVSNDAFI GPNMVPSDIE VVATTPLADG  360
QELPYIPDDL DMVPNDAFIG PDVIPSDIEK FLLNPDEEWN SNLLVEMDKF IAGLDPSCDQ  420
LLQPNPEIDD TTQEMDSVPP VDDYLMQGSE DKPLENASPT GQVQQLTQQM GLLSSQTKEA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	243	KKRRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-103	HSF family protein