PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015276.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 265aa    MW: 30383.1 Da    PI: 7.0599
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015276.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY902e-28138197159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            ++D+y+W KYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs +d  +v++tYegeHnh+
  Cse_sc015276.1_g050.1 138 VKDEYQWTKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSLDDVGIVVVTYEGEHNHR 197
                            58***************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MVAASHALDL NLNLFHITDD DTPVVEVQSG SDNEDDYDDG SFEKEVDDHT VRNLGRISDE  60
NKKLKEMLTI VWDNYNTLQT QVKKIIQDKE VVESSPKKRK FVETVQQSLW KRPNKELLKS  120
GIQRVYVQTD PSDKSLIVKD EYQWTKYGQK VTRDNPSPRA YYKCSFAPSC PVKKKVQRSL  180
DDVGIVVVTY EGEHNHRSTK QEAAYALTNK YDISTSKQMF NSTKERTTFN EVLVKQMAAY  240
LSKDSNFTDK LAAAIYSKTL DASLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-55WRKY family protein