PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc015204.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 20916.8 Da PI: 9.2991 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 183.7 | 4.4e-57 | 7 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeelv++yL+kkv++k+++l +vik+vd+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk g+Wka Cse_sc015204.1_g010.1 7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIKDVDLYKIEPWDLQElcKLGTeEQNEWYFFSHKDKKYPTGTRTNRATKIGFWKA 93 69****************************.9***************954544442556***************************** PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk+++s k++lvg++ktLvfykgrap+g+k+dW+mheyrle Cse_sc015204.1_g010.1 94 TGRDKAIYS-KHNLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 *********.899*****************************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence |
MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIK DVDLYKIEPW DLQELCKLGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATKIGF WKATGRDKAI YSKHNLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN AMTQASDISI FQHSRSPICT SFCPTSIHST VMALVSTLR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12260.1 | 2e-96 | NAC family protein |