PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015132.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HD-ZIP
Protein Properties Length: 859aa    MW: 94919.5 Da    PI: 6.6648
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015132.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox598e-191876357
                           --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
               Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                           k  ++t+eq+e+Le+l++ +++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  Cse_sc015132.1_g010.1 18 KYVRYTPEQVEALEKLYHDCPKPSSVRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 76
                           5679*****************************************************97 PP
2START161.47e-511623702205
                            HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT. CS
                  START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg. 88 
                            +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++++ve+l d++  W ++++++++l+v+ ++ 
  Cse_sc015132.1_g010.1 162 IAEETLTEFLSKATGTAIEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVALEPTRVVEILKDRP-SWFRDCRAVDVLNVLPTAn 248
                            789*******************************************************9998888888.****************999 PP

                            .EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE CS
                  START  89 .galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvd 171
                             g+++  +++l+a+++l+  Rdf+ +Ry+   ++g++v++++S+ ++q+ p+    +++vRa++lpSg+li+p ++g+s +++v+h++
  Cse_sc015132.1_g010.1 249 gGTIEILYMQLYAPTTLATaRDFLLLRYTSITEDGSLVVCERSLHNTQNGPSipsXPNFVRAQMLPSGYLIRPYEGGGSIIHIVDHMN 336
                            9**************************************************99999******************************** PP

                            --SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                  START 172 lkgrlphwllrslvksglaegaktwvatlqrqce 205
                            l++++++++lr+l++s+++ ++kt++ +l+++++
  Cse_sc015132.1_g010.1 337 LEAWSVPEVLRPLYESSTMLAQKTTMMALRQLRQ 370
                            *****************************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 859 aa     Download sequence    
MAMSCKDDGK GEMMDNGKYV RYTPEQVEAL EKLYHDCPKP SSVRRQQLIR ECPILSNIEP  60
KQIKVWFQNR RCREKQRKEA SRLQTVNRKL TAMNKLLMEE NDRLQKQVSH LVYENGHFRQ  120
HTQKTALGTK DTSCESVVTN GQNRLTPQQP PRDASPAGLM SIAEETLTEF LSKATGTAIE  180
WVQMPGMKPG PDSIGIVAIS HGCTGVAARA CGLVALEPTR VVEILKDRPS WFRDCRAVDV  240
LNVLPTANGG TIEILYMQLY APTTLATARD FLLLRYTSIT EDGSLVVCER SLHNTQNGPS  300
IPSXPNFVRA QMLPSGYLIR PYEGGGSIIH IVDHMNLEAW SVPEVLRPLY ESSTMLAQKT  360
TMMALRQLRQ IALEVSQSSS PSNWGRRPAA LRALSQRLNR GFNEALNGFT DEGWSLMTND  420
GVDDVTIIVN SSPQKLMGLN LPFANGYQSV SNSVLCAKAS MLLQNVPPAL LLRFLREHRS  480
EWADNNIDAY AAAAVKLGPC NLQGTRVGNF GGQVILPLAH TIEHEELLEV IKMEGVGHCP  540
EDALMPRDMF LLQVCNGMDE NAVGMCAELI FAPIDASFAD DAPLVPSGFR IIPLDSTKVR  600
LHVHLEEQHV RVGWFGQRDG SSPNRTLDLA SALEIRGSGN KISSDLNVAS GTARSVMTIA  660
FEFVCESHMQ ETVAAIARQY VRNIISSVQR VASALSPNMN LNGSLQAPLG TPEAHVLASW  720
ISRSYSCYLG GELLKTEGER SKNALKSLWS HSDAIMCCSL KALPVFTFAN QAGLDMLETT  780
LVALQDISLE KVLDEHGRKG LFTEFAQIMQ QGFTCLQGGV CSSSMGRPVS YERAVAWKVL  840
NDEEDVHCVC FMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52150.20.0HD-ZIP family protein