PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014719.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 409aa MW: 46085 Da PI: 6.3572

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014719.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.7	1.6e-07	354	387	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + Cse_sc014719.1_g020.1 354 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 387 569*****************************87 PP
2	ELK	28.9	2.6e-10	308	329	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ Cse_sc014719.1_g020.1 308 ELKHELKQGYKEKIVDIREEIL 329 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MAYHPPNDIS QDMPLEQPPF SNNSTGKDHW LNSAILRQQA GHNNSNIFLN LQTNNNNLDS 60 ASSQHHLHNN NNNNQWLSRP ILHRNISNVT GSDRNDFNDH SRNLAAGQVV VDHHNVVGGG 120 EPEVVAGDGE GGGGALMGWQ NARQKAEVLS HPLYEQLLAA HVACLRIATP VDQLPRIDAQ 180 LAQSQQVVSK YSSLGDLDHD HDHDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA 240 CWEIEQSLQS LTGVSPGEGT GATMSDDDED QVDSDANLFD GSLDAHDSMG FGLPTESERS 300 LMERVRQELK HELKQGYKEK IVDIREEILR KRRAGKLPGD TTSVLKSWWQ SHAKWPYPTE 360 EDKARLVQET GLQLKQINNW FINQRKRNWH SNPSSSTVLK SKRKRLVGR

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MAYHPPNDIS QDMPLEQPPF SNNSTGKDHW LNSAILRQQA GHNNSNIFLN LQTNNNNLDS  60
ASSQHHLHNN NNNNQWLSRP ILHRNISNVT GSDRNDFNDH SRNLAAGQVV VDHHNVVGGG  120
EPEVVAGDGE GGGGALMGWQ NARQKAEVLS HPLYEQLLAA HVACLRIATP VDQLPRIDAQ  180
LAQSQQVVSK YSSLGDLDHD HDHDDKELDQ FMTHYVLLLC SFKEQLQQHV RVHAMEAVMA  240
CWEIEQSLQS LTGVSPGEGT GATMSDDDED QVDSDANLFD GSLDAHDSMG FGLPTESERS  300
LMERVRQELK HELKQGYKEK IVDIREEILR KRRAGKLPGD TTSVLKSWWQ SHAKWPYPTE  360
EDKARLVQET GLQLKQINNW FINQRKRNWH SNPSSSTVLK SKRKRLVGR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	385	405	RKRNWHSNPSSSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	1e-161	TALE family protein