PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc014595.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 23407.6 Da PI: 8.4416 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 73 | 123 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f++ae Aa a+++a+ + +g Cse_sc014595.1_g020.1 73 SYRGVRKRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAAMAYDQAAFSTRG 123 69*******.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
MTTSFLEFEQ STPDYSSESS CSWDELLYQY NAHPFNLFNS IDTFLPNIES PILSNPTLKN 60 EETTCKTPKK TKSYRGVRKR PWGKFAAEIR DSTRNGIRVW LGTFDSAEAA AMAYDQAAFS 120 TRGTLAVLNF PVERVKESLK EMKYGFEEGC SPVMTLKKRH SLRKIRKPKA EKPKVAHEER 180 PTVVFQDLGV DYMEALLLFS ESLTP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-46 | ERF family protein |