PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014373.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 569aa MW: 66360.5 Da PI: 7.1717

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014373.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46	1.8e-14	86	191	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..................tekerrtraetrtgCkaklkvkk 70 ++Y eYA+++ Fs+rks++k++ ng it++ C+k g ++++ k +++e+r+++ t t+Cka+++ k+ Cse_sc014373.1_g020.1 86 NMYLEYAQKARFSIRKSTTKRK--NGDITHKYILCNKAGLPRKTVVKdtlvdkqlnennqkedakKTRENRNSNFTVTDCKACVMFKR 171 58************998877..999**********99988889*********9888888889999********* PP FAR1 71 ek.dgkwevtkleleHnHel 89 + + ++++++ ++Hn +l Cse_sc014373.1_g020.1 172 IHgTPAYKLYDFTENHNQPL 191 999************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MASTSEKNAS GVHTGTVPDE TQPGNVDDIG ISDEHDQSDR SDFEGSESDD EVVPTPNGHK 60 YWIQEVPFEE KPIEGDVFDN FDEAYNMYLE YAQKARFSIR KSTTKRKNGD ITHKYILCNK 120 AGLPRKTVVK DTLVDKQLNE NNQKEDAKKT RENRNSNFTV TDCKACVMFK RIHGTPAYKL 180 YDFTENHNQP LLDENNMDLS TVKRKLDFSD KLFIHRASLS NIGPTKAHRL RVAFMGGYDK 240 VRGKPSDWKN FRRSLNKYIG PRDAQMLVDK MNDMKKHVPN FTFEYHCVND VLDRMFWADE 300 TMKCNYHAFG DVVSFDATYR TNRYRMIFVP FTGIDHHQKC VTFRAALMSD ETTDSYEWIL 360 TAFKQAHGKA PILAVTDQDV ALRKAVEAVL PESNHRLCMW HITQKLPGKI CGELESDAEF 420 KKMFHKLIWN AFIGPEEFEE CWHALIGMFN LTGNKWLSEM FEIRDRWIPS YFKDFPMCCL 480 MKTTSRSECS NAFFRIYSHS GNMLVQFMLC FEAAMEKQRY TQRVMDNRTF ESTPVMFTDL 540 PIERHACQVY SRFIFREVIL YLCIHISKF

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MASTSEKNAS GVHTGTVPDE TQPGNVDDIG ISDEHDQSDR SDFEGSESDD EVVPTPNGHK  60
YWIQEVPFEE KPIEGDVFDN FDEAYNMYLE YAQKARFSIR KSTTKRKNGD ITHKYILCNK  120
AGLPRKTVVK DTLVDKQLNE NNQKEDAKKT RENRNSNFTV TDCKACVMFK RIHGTPAYKL  180
YDFTENHNQP LLDENNMDLS TVKRKLDFSD KLFIHRASLS NIGPTKAHRL RVAFMGGYDK  240
VRGKPSDWKN FRRSLNKYIG PRDAQMLVDK MNDMKKHVPN FTFEYHCVND VLDRMFWADE  300
TMKCNYHAFG DVVSFDATYR TNRYRMIFVP FTGIDHHQKC VTFRAALMSD ETTDSYEWIL  360
TAFKQAHGKA PILAVTDQDV ALRKAVEAVL PESNHRLCMW HITQKLPGKI CGELESDAEF  420
KKMFHKLIWN AFIGPEEFEE CWHALIGMFN LTGNKWLSEM FEIRDRWIPS YFKDFPMCCL  480
MKTTSRSECS NAFFRIYSHS GNMLVQFMLC FEAAMEKQRY TQRVMDNRTF ESTPVMFTDL  540
PIERHACQVY SRFIFREVIL YLCIHISKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-66	FAR1 family protein