PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc014205.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 206aa MW: 24027.2 Da PI: 5.5178 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.2 | 7.7e-20 | 54 | 106 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++++t+eq++ Le+ F ++++ e++ +LA++lgL+ rqV vWFqNrRa++k Cse_sc014205.1_g010.1 54 KRKLTDEQVTLLEQNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWK 106 4589************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 120.1 | 1.2e-38 | 53 | 144 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kr+l++eqv+lLE++F e+kLe+erK +la+eLgl+prqvavWFqnrRAR+k+k+lE++y++Lk+++d+ + e++rLe+ev +L+e Cse_sc014205.1_g010.1 53 RKRKLTDEQVTLLEQNFGDEHKLESERKDRLASELGLDPRQVAVWFQNRRARWKSKKLEEEYSKLKNEHDSTVLEKCRLETEVLRLKE 140 8*************************************************************************************** PP HD-ZIP_I/II 90 elke 93 +l+e Cse_sc014205.1_g010.1 141 QLSE 144 *986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MTTNMKTQVD DQMVLLSQYY PGIYDQLIPE QGEVVKPRRR RKKSKADGSS SMRKRKLTDE 60 QVTLLEQNFG DEHKLESERK DRLASELGLD PRQVAVWFQN RRARWKSKKL EEEYSKLKNE 120 HDSTVLEKCR LETEVLRLKE QLSEAEKEMN RLVERSDGIS STSPSSSFSM EAMEPPFLGG 180 FGMEGLENVF YLPENNYIQG LDWLNI |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 56 | RRRRKKSKADGSSSMRKRK |
2 | 39 | 57 | RRRRKKSKADGSSSMRKRK |
3 | 40 | 58 | RRRRKKSKADGSSSMRKRK |
4 | 41 | 59 | RRRRKKSKADGSSSMRKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36740.1 | 3e-58 | HD-ZIP family protein |