PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013964.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 342aa MW: 38285.7 Da PI: 7.5965

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013964.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.8e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l ++++ +G+g+W+t ++ g+ R++k+c++rw +yl Cse_sc013964.1_g010.1 14 KGPWTQEEDRKLTQYIQIHGPGNWRTLPNNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.4	2.9e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia +++ gRt++++k++w+++ Cse_sc013964.1_g010.1 67 RGRFSLEEEETIIQLHSVLGNK-WSAIATRLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MGRSPCCDKA GLKKGPWTQE EDRKLTQYIQ IHGPGNWRTL PNNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SLEEEETIIQ LHSVLGNKWS AIATRLPGRT DNEIKNYWNT HIRKKLLRNG 120 IDPVTHTPRL DLSHLSSILN SAQINLSNLL GLQTLVNPDV LSLVTLLAAS SSNQENRELL 180 LHNHLATMNQ TPNMQIRNCA STPSSLSSSQ ILEKTNPMFA TDGQYFSGHM VNHNDQNSQV 240 NSVSLCSTST DNSVSLPSYS PQFNAQNSEN SSYHPSNVEN NIHISKNFNF DSILSVPMSS 300 PAHVNSSSTY INSSGSEETR GSPCSNMFKF EIPESFEFDD FM

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MGRSPCCDKA GLKKGPWTQE EDRKLTQYIQ IHGPGNWRTL PNNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SLEEEETIIQ LHSVLGNKWS AIATRLPGRT DNEIKNYWNT HIRKKLLRNG  120
IDPVTHTPRL DLSHLSSILN SAQINLSNLL GLQTLVNPDV LSLVTLLAAS SSNQENRELL  180
LHNHLATMNQ TPNMQIRNCA STPSSLSSSQ ILEKTNPMFA TDGQYFSGHM VNHNDQNSQV  240
NSVSLCSTST DNSVSLPSYS PQFNAQNSEN SSYHPSNVEN NIHISKNFNF DSILSVPMSS  300
PAHVNSSSTY INSSGSEETR GSPCSNMFKF EIPESFEFDD FM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	8e-95	MYB family protein