PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013892.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 417aa    MW: 46911.5 Da    PI: 4.1175
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013892.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.82.5e-08220267347
                            SS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   3 rWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                            +WT+e+++l+ ++v+  +       W+  a++++  Rt+ +++s+++++
  Cse_sc013892.1_g020.1 220 KWTEEDEQLFHKVVNSNPVSlgknFWNHLAAEFP-SRTRQEIVSYYFNV 267
                            8*************9755445555**********.***********996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    
MVQKRQLVEN ECDVSSKRLK SQYGCELVPC FEPTKDDVPF NTDTDEACFY KPVLEVDYRC  60
VSGKLTDLPV CTDKDVDCTL PGRLSTSSWA SSTLTEEDVG LDASAVQTPD AYSYLLEHSP  120
LKQVPIGPEY QAEIPEWRVY DEDGVKFMGS CIIPIPPDPT LHGSDAVGSG RTDCYCNDPG  180
SLECVQQHIK EARETLKASI GQEKFAELGF SNMGEVVAEK WTEEDEQLFH KVVNSNPVSL  240
GKNFWNHLAA EFPSRTRQEI VSYYFNVFVL RRRAEQNRCD PMNADSDDDE WQGSDGLEEE  300
DEIPKLDSYE HGNGIEETRQ SHNSCSFDST SQPSDNTECG DVVQYDSCTS SDTGEPSVSK  360
LKVDSNRSWG NHEFIFEPLD SRVWDVGFFS CSRTKTDFLS TGSMIEEIFG DESWDFK