PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013861.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 450aa    MW: 49783.8 Da    PI: 4.9923
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013861.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS362.27.2e-111784453374
                   GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPi 90 
                             lLl+cAe++++++l la++lL ++sel+sp g++ +R+aayf+ AL+ar+ +s  ++y+ l+ ++ + ++ ++  +al+ ++ ++P+
  Cse_sc013861.1_g010.1  78 GLLLQCAECIAADNLDLANNLLPEISELSSPFGSSPERVAAYFADALQARVISSYLGTYSPLHIQTLTLTQNQKIYNALQSYNSITPF 165
                            58******************************************************************999***************** PP

                   GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfef 178
                            +kf+h+t NqaI +++e+ee+vHiiD+di+qGlQWp L++ LasR+++  s++iTg+g     s ++le+tg+rL++fA++l +pfef
  Cse_sc013861.1_g010.1 166 IKFTHFTSNQAIFQSLEHEETVHIIDLDIMQGLQWPGLFHILASRTRKLRSVKITGIGT----SIHMLEATGRRLKDFATSLSLPFEF 249
                            ***********************************************************....9************************ PP

                   GRAS 179 nvl.......vak..rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerf 257
                             +l       v++  +l+d+ ++ L++++gE ++V++++  h l+d ++s        L+l+  ++Pk+v++veq+++h ++sFl rf
  Cse_sc013861.1_g010.1 250 VPLeakignmVTSsmTLDDV-TDFLKIRSGEPVVVHWMH--HCLYDVTGSDYG----ALRLLEMIKPKLVTIVEQDLSH-GGSFLGRF 329
                            **977777753331233333.55679999*********9..888888888888....**********************.789***** PP

                   GRAS 258 lealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                            +eal+yysalfd++  ++ +++ er +vE++l+g ei+n+va  g +r+ + + +e+W e l+++GF+pv+l  + a+qa+lll +++
  Cse_sc013861.1_g010.1 330 VEALHYYSALFDAVGDGVETDNVERFTVEQQLFGCEIKNIVAVGGPKRTGEVK-VERWGEELGRVGFRPVSLAGNPAAQASLLLGMFP 416
                            ***********************************************998887.9********************************* PP

                   GRAS 346 sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                            ++gy++ ee+g+l lgWkd +L+++SaW+
  Cse_sc013861.1_g010.1 417 WKGYTLVEENGCLKLGWKDLSLLTASAWE 445
                            ****************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MLQSLLLQQP PPMMNTTTSK RSIGELHNDD VNIASTVGVI SAGDADVIES SRFKRRNIED  60
TLLDQSEEAE SSGLRLLGLL LQCAECIAAD NLDLANNLLP EISELSSPFG SSPERVAAYF  120
ADALQARVIS SYLGTYSPLH IQTLTLTQNQ KIYNALQSYN SITPFIKFTH FTSNQAIFQS  180
LEHEETVHII DLDIMQGLQW PGLFHILASR TRKLRSVKIT GIGTSIHMLE ATGRRLKDFA  240
TSLSLPFEFV PLEAKIGNMV TSSMTLDDVT DFLKIRSGEP VVVHWMHHCL YDVTGSDYGA  300
LRLLEMIKPK LVTIVEQDLS HGGSFLGRFV EALHYYSALF DAVGDGVETD NVERFTVEQQ  360
LFGCEIKNIV AVGGPKRTGE VKVERWGEEL GRVGFRPVSL AGNPAAQASL LLGMFPWKGY  420
TLVEENGCLK LGWKDLSLLT ASAWEPLDHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-169GRAS family protein