PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc013825.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

E2F/DP

Protein Properties

Length: 509aa MW: 56986.1 Da PI: 5.3652

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc013825.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	127	192	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg Cse_sc013825.1_g030.1 127 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAAETL---KV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 192 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 509 aa Download sequence
LSPPPDRPKP DKAFPFREVG VGVWLPFHSL AGNRYHILHV YKLDQHLFIA ELKGDVAAFE 60 AESNEQNSTP GNTLAVTTPL QTPVSGKGSK AQKVSRTGKF NRAGSQTPAS NADSPSEHNL 120 TSLGPCRYDS SLGLLTKKFI NLIKHAEDGM LDLNKAAETL KVQKRRIYDI TNVLEGIGLI 180 EKKLKNRIQW KGLDASSAET DENVASLQAE VENLSVEEHR LDEKTREMQE RLRDLSEDEN 240 NQKWLFVTEE DIKSLPCFLE ETLIAIKAPH GTTLEVPDPD EAVDYPQRRC RIVLRSTMGP 300 IDVYLVSQFE EKHEEINRVA NSSIPSTSEM IENPITETAM AASQGHGIGM QRTDTHTCAD 360 VNASEDFVSG IMKIVPDIDS NADYWLISDA DVSITDIWRT ECILLFLVSC LVLLCTRTSH 420 TTYKYVHLNF NHKRDKLNKN IAKRVTEQSK MSQVIQSSLT LEPIASVEWN NMGMHQDDYA 480 MPGVATAHDQ TLKSDHLQVH SDENKSQDS

Sequence ? help Back to Top

Protein Sequence Length: 509 aa Download sequence

LSPPPDRPKP DKAFPFREVG VGVWLPFHSL AGNRYHILHV YKLDQHLFIA ELKGDVAAFE  60
AESNEQNSTP GNTLAVTTPL QTPVSGKGSK AQKVSRTGKF NRAGSQTPAS NADSPSEHNL  120
TSLGPCRYDS SLGLLTKKFI NLIKHAEDGM LDLNKAAETL KVQKRRIYDI TNVLEGIGLI  180
EKKLKNRIQW KGLDASSAET DENVASLQAE VENLSVEEHR LDEKTREMQE RLRDLSEDEN  240
NQKWLFVTEE DIKSLPCFLE ETLIAIKAPH GTTLEVPDPD EAVDYPQRRC RIVLRSTMGP  300
IDVYLVSQFE EKHEEINRVA NSSIPSTSEM IENPITETAM AASQGHGIGM QRTDTHTCAD  360
VNASEDFVSG IMKIVPDIDS NADYWLISDA DVSITDIWRT ECILLFLVSC LVLLCTRTSH  420
TTYKYVHLNF NHKRDKLNKN IAKRVTEQSK MSQVIQSSLT LEPIASVEWN NMGMHQDDYA  480
MPGVATAHDQ TLKSDHLQVH SDENKSQDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	166	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-130	E2F/DP family protein