PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013607.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 185aa    MW: 19803.4 Da    PI: 6.7298
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013607.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26098.18.7e-312104198
                 DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilkl 83 
                            +C++C+vlr++C+++C+l+  +     p++q++++ +v+k+FG++ ++++l+++pe++r+++++sl++eA+ r+ +P++Gavg+++++
  Cse_sc013607.1_g020.1   2 SCNGCRVLRKGCNDNCILRHSLhgiatPQAQANATVFVAKFFGRAGLMSFLSSVPESQRPALFQSLLFEACGRTVNPINGAVGLLWTG 89 
                            6*************************************************************************************** PP

                 DUF260  84 qqqleqlkaelallk 98 
                            +++++q+++e++l++
  Cse_sc013607.1_g020.1  90 NWHVCQSAVETVLRG 104
                            ********9998765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSCNGCRVLR KGCNDNCILR HSLHGIATPQ AQANATVFVA KFFGRAGLMS FLSSVPESQR  60
PALFQSLLFE ACGRTVNPIN GAVGLLWTGN WHVCQSAVET VLRGGSIQAM PEIFSGGSTP  120
VMTDDNDSSG CNFDVSKLKP EDLDLGLTSS GGGRTRRRAD TPSDVSETTT LESECSESKL  180
LRLFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49940.14e-67LBD family protein