PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013472.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 350aa    MW: 39142.9 Da    PI: 9.0179
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013472.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1023.3e-32126182259
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkver   d+ v+ei+Y+g+Hnh+
  Cse_sc013472.1_g040.1 126 EDGYNWRKYGQKQVKGSEYPRSYYKCTHQSCPVKKKVERGV-DGLVTEIIYKGKHNHQ 182
                            8****************************************.***************8 PP
2WRKY47.92.7e-152763161959
                            SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY  19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            +  +sYY+Ct +gC+v+k+ver ++dpk v++tYeg+Hnh+
  Cse_sc013472.1_g040.1 276 KWRKSYYKCTIKGCNVRKHVERPSSDPKSVITTYEGKHNHQ 316
                            5568************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MDDNKKSIPL STPYLRPTIS IPTSSLVDNT FMGPGETPGP MTLISNLFSE NDVGPDTRTF  60
SQLLAGLSPA TLLESPAQAA QLPIPTTHHH VPPPMPDHNV TMMAPELSKS SSHSHPPLVA  120
ADKPAEDGYN WRKYGQKQVK GSEYPRSYYK CTHQSCPVKK KVERGVDGLV TEIIYKGKHN  180
HQPPRTVGNF NDTEPFNDQT SYFNYSRENS SIKKDQESSH EMSGSWDNDD VAKHQAKKRN  240
IEVKGCDPVS SHRTLPDSRI IVQATSKIDL LNDGYKWRKS YYKCTIKGCN VRKHVERPSS  300
DPKSVITTYE GKHNHQALVS KNSIRDATND TTSQLKPNNP IGLLRLKEEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.12e-81WRKY family protein