PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc013456.1_g020.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 302aa    MW: 33824 Da    PI: 10.0262
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc013456.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.83.3e-31236293359
                            -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            D+y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +d +++++tYegeHnh+
  Cse_sc013456.1_g020.1 236 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLDDSTMLIVTYEGEHNHT 293
                            9************************9988****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
GFNKFGDFME EIEAANKAAV ESCHRILNLL AQPKDHVQAM NLTVQTGEAV TNFKKVVSLL  60
DDGLSHSRVR RFKKTQNFIP QNILLDNPGF QERQNGNPQQ NGGQNTNYQF LQHNHQLQLK  120
QQAEMMYRRS NSGINLNFDN AGCTPTISSN RSFMSSLSMD GSVTTLDGSS FHLIGSTRST  180
DQGSQQHKPR CSARGEDGSV KCGSSGRCHC KKRKHRVKRS IKVPAVSNKL ADIPPDEYSW  240
RKYGQKPIKG SPHPRGYYKC SSMRGCPARK HVERCLDDST MLIVTYEGEH NHTRVPSQSA  300
NT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.11e-69WRKY family protein