PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013456.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 302aa MW: 33824 Da PI: 10.0262 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.8 | 3.3e-31 | 236 | 293 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d +++++tYegeHnh+ Cse_sc013456.1_g020.1 236 DEYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLDDSTMLIVTYEGEHNHT 293 9************************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
GFNKFGDFME EIEAANKAAV ESCHRILNLL AQPKDHVQAM NLTVQTGEAV TNFKKVVSLL 60 DDGLSHSRVR RFKKTQNFIP QNILLDNPGF QERQNGNPQQ NGGQNTNYQF LQHNHQLQLK 120 QQAEMMYRRS NSGINLNFDN AGCTPTISSN RSFMSSLSMD GSVTTLDGSS FHLIGSTRST 180 DQGSQQHKPR CSARGEDGSV KCGSSGRCHC KKRKHRVKRS IKVPAVSNKL ADIPPDEYSW 240 RKYGQKPIKG SPHPRGYYKC SSMRGCPARK HVERCLDDST MLIVTYEGEH NHTRVPSQSA 300 NT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G30590.1 | 1e-69 | WRKY family protein |