PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013426.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | LFY | ||||||||
Protein Properties | Length: 418aa MW: 46503.3 Da PI: 7.2422 | ||||||||
Description | LFY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FLO_LFY | 636.1 | 5.6e-194 | 7 | 394 | 1 | 385 |
FLO_LFY 1 mdpeafsaslfkwdpraaaaapparlleeaavseapleaaaaaaark...lr......eleelfkayGvryltvakiaelGftvstLv 79 mdp+a+sa+lfkwd+ra+ a+p++rl+e +++++p+++ aa+a + +r +lee+f+ayGvry+t++ki+elGft++tL+ Cse_sc013426.1_g020.1 7 MDPDALSANLFKWDTRATLAPPSSRLYEPITLHQPPQSMVAASAPMGsylVResrdlgGLEEVFHAYGVRYYTATKISELGFTAHTLL 94 9****************99999999999999988884433333222211244777777****************************** PP FLO_LFY 80 dmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeetaldalsqeglseepvqeekeaagsggeg 167 dmkdeeld++m+sls+ifr++llvGeryGikaavraerrr++eee ++rr lls+d++++ldalsqeglseepvq+e+eaagsgg+g Cse_sc013426.1_g020.1 95 DMKDEELDEMMNSLSHIFRWELLVGERYGIKAAVRAERRRIDEEE--SRRRYLLSNDNANTLDALSQEGLSEEPVQQENEAAGSGGGG 180 *******************************************87..89999********************************9998 PP FLO_LFY 168 lgeaelvaaeekkseeekkkaskkkqkrkkkkelkseededeeeeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdL 255 g++el+++ + + k+ +++ k+ + ++ +s+ ++ +++e+ed+ ++g +g erqrehPfivtepgevargkknGLDYLf+L Cse_sc013426.1_g020.1 181 -GAWELAVIGRCGGVKAKHGV-QRRIKKGRIES-SSHAHHGGDDNESEDDPDNG-GGAERQREHPFIVTEPGEVARGKKNGLDYLFHL 264 .99999999964433333333.33344444333.33433444444444444444.477****************************** PP FLO_LFY 256 yeqCrefLlqvqkiakerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykp 343 yeqCrefL+qvq+iake+GekcPtkvtnqvfr+akkagasyinkPkmrhYvhCYalhcLdee snalrra+kergenvGawrqacykp Cse_sc013426.1_g020.1 265 YEQCREFLVQVQNIAKEKGEKCPTKVTNQVFRFAKKAGASYINKPKMRHYVHCYALHCLDEEGSNALRRAYKERGENVGAWRQACYKP 352 **************************************************************************************** PP FLO_LFY 344 lvaiaarqgwdidavfnahprLsiWYvPtkLrqLChlerska 385 lv+iaarqgwdida+fn+hprLsiWYvPtkLrqLCh+ers+a Cse_sc013426.1_g020.1 353 LVTIAARQGWDIDAIFNSHPRLSIWYVPTKLRQLCHAERSAA 394 ***************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 418 aa Download sequence |
MCEKTKMDPD ALSANLFKWD TRATLAPPSS RLYEPITLHQ PPQSMVAASA PMGSYLVRES 60 RDLGGLEEVF HAYGVRYYTA TKISELGFTA HTLLDMKDEE LDEMMNSLSH IFRWELLVGE 120 RYGIKAAVRA ERRRIDEEES RRRYLLSNDN ANTLDALSQE GLSEEPVQQE NEAAGSGGGG 180 GAWELAVIGR CGGVKAKHGV QRRIKKGRIE SSSHAHHGGD DNESEDDPDN GGGAERQREH 240 PFIVTEPGEV ARGKKNGLDY LFHLYEQCRE FLVQVQNIAK EKGEKCPTKV TNQVFRFAKK 300 AGASYINKPK MRHYVHCYAL HCLDEEGSNA LRRAYKERGE NVGAWRQACY KPLVTIAARQ 360 GWDIDAIFNS HPRLSIWYVP TKLRQLCHAE RSAAVAVATG STTVGGGNDA GGVGHMLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61850.1 | 1e-155 | LFY family protein |