PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013380.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | SRS | ||||||||
Protein Properties | Length: 174aa MW: 19015.1 Da PI: 7.4739 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 145.5 | 4.4e-45 | 2 | 135 | 6 | 154 |
DUF702 6 asCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklss 93 ++C dCGn+akkdC + RCR CCk +gf+C+th+kstWvp++ r++ ++ +a++++ + +++ ++q+ +++ ++s Cse_sc013380.1_g020.1 2 MRCLDCGNKAKKDCLYYRCRSCCKGHGFQCQTHIKSTWVPISTRQSVRNLAATSAAPP-H-------NDH-----HQQEEQQQLGIPS 76 68****************************************9988544444332222.1.......111.....1222233344444 PP DUF702 94 aeskkeletsslPeevsseavfrcvrvssvdd..geeelaYqtavsigGhvfkGiLydqGlee 154 ++ + s+P+evs ea f cvrv+s+++ +++aY+t+++igGh+fkG+LydqG+++ Cse_sc013380.1_g020.1 77 SS---GF-GGSFPTEVSGEATFTCVRVTSLEQnaVVDQYAYETSINIGGHLFKGLLYDQGPHQ 135 43...23.457********************954579***********************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MMRCLDCGNK AKKDCLYYRC RSCCKGHGFQ CQTHIKSTWV PISTRQSVRN LAATSAAPPH 60 NDHHQQEEQQ QLGIPSSSGF GGSFPTEVSG EATFTCVRVT SLEQNAVVDQ YAYETSINIG 120 GHLFKGLLYD QGPHQPVVNS RDMDANAGDP HNSTININQD SQAISSRRSS GSLP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75520.1 | 1e-33 | SRS family protein |