PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc013125.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 26632.8 Da PI: 7.2804 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.6 | 1.2e-28 | 170 | 228 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYG+K+vk+s++pr+Y++C++ gC+vkk++er+a+d ++v++tY g Hnh+ Cse_sc013125.1_g030.1 170 VDDGFKWRKYGKKKVKSSPYPRNYFKCSTVGCSVKKRIERDANDINYVITTYDGVHNHK 228 59********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MFPSVSHTNR RPSQQQTEIS VSSPFYYSLD TNYDQACEFT FEEIFDNYQP SIDEQPSYKE 60 STHTDFAAHC GVFEQNRVFQ EKVIVDDQVS SFVDFEAHSS TNEHNSIMHK AITNGSTSKR 120 STTANISLMP QAINFYMQLI LFLKLDAEKR EMSHAGLKLA LRMKTQLEVV DDGFKWRKYG 180 KKKVKSSPYP RNYFKCSTVG CSVKKRIERD ANDINYVITT YDGVHNHKDS S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 3e-32 | WRKY family protein |