PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012947.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 463aa MW: 51109.8 Da PI: 6.9461

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012947.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98	6e-31	247	305	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed+++v++tYeg+Hnh+ Cse_sc012947.1_g020.1 247 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDKTIVITTYEGNHNHP 305 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MDEIPSNGLT FDLDRITSSI SDHHRVVPPF MESSSHEFCH DKQINEVDFF NDQKLSIGSS 60 SNFIRHKELS SVNINYDFEF DSLTIQTRLN LVTGNTSSDQ SIIEDGMSSN SDEKRTKHEL 120 ATVQAEYERM SGENQRLKDA LNKVIIDYKT LEMHLATILQ YKREQKSVED RDGRRSAMGR 180 PRSIMDLALA AEPNENSHSS SEGRSHSPIN KNNSMDDNNR KIDQSTEATI RKARVSVRAR 240 SEASVITDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED KTIVITTYEG 300 NHNHPLPPSA MAMASTTSSA ARMLLSGSMP SADGLTNSNF LTRTLLPCSS NMATISASAP 360 FPTITLDLTQ TPNPFQLPFN SSNPNTMSQM FGQSLYNQSK FSGLQMSQGD PQGRMADTVS 420 ALRADTNFTA ALATAISSMI SGGTSDDFHG SNNKVSNSNF QGN

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MDEIPSNGLT FDLDRITSSI SDHHRVVPPF MESSSHEFCH DKQINEVDFF NDQKLSIGSS  60
SNFIRHKELS SVNINYDFEF DSLTIQTRLN LVTGNTSSDQ SIIEDGMSSN SDEKRTKHEL  120
ATVQAEYERM SGENQRLKDA LNKVIIDYKT LEMHLATILQ YKREQKSVED RDGRRSAMGR  180
PRSIMDLALA AEPNENSHSS SEGRSHSPIN KNNSMDDNNR KIDQSTEATI RKARVSVRAR  240
SEASVITDGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED KTIVITTYEG  300
NHNHPLPPSA MAMASTTSSA ARMLLSGSMP SADGLTNSNF LTRTLLPCSS NMATISASAP  360
FPTITLDLTQ TPNPFQLPFN SSNPNTMSQM FGQSLYNQSK FSGLQMSQGD PQGRMADTVS  420
ALRADTNFTA ALATAISSMI SGGTSDDFHG SNNKVSNSNF QGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-117	WRKY family protein