PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012558.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 1106aa MW: 122927 Da PI: 8.0979

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012558.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.4	8.2e-30	218	274	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk se+prsYY+Ct+++Cpvkkkv ++ d+++ +i+Y+g+Hnh+ Cse_sc012558.1_g030.1 218 SDGYNWRKYGQKQVKASEHPRSYYKCTHPNCPVKKKVGQAL-DGHISDIVYKGKHNHD 274 7*************************************9.*************7 PP
2	WRKY	102.3	2.7e-32	425	483	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDg++WrKYGqK+vkg+++prsYY+Ct++gC+v+k+ver+ dpk v++tYeg+Hnh+ Cse_sc012558.1_g030.1 425 LDDGFKWRKYGQKVVKGNTNPRSYYKCTFPGCNVRKHVERAPLDPKSVVTTYEGKHNHD 483 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1106 aa Download sequence
MTETNGGSPQ QQPRRQPPPM LSLPQKQQTS SFENIFTGGP SSGFSPGPMT LVSNYFSDHF 60 SDGSFSQLLA GAMNSPVSQI SSDDNKNISS RGFKDKRPMD LVISQSPTGF MFPNLFSPSG 120 LLNSPGFFSP LQSPLVSHQQ ALAHVTAQAA FSQSYFNNVQ PENYTGGLGT VVNEEETRMV 180 NANAELEDSQ IGSPDELSVS QSDVSESQHV ISGSADISDG YNWRKYGQKQ VKASEHPRSY 240 YKCTHPNCPV KKKVGQALDG HISDIVYKGK HNHDPPPPNK RGKDSADVNK LNNSQMETRV 300 AEQPVADQGF NQMMRNDQGF SQLMRNDQGF HQMARNDQGY NQLMENVQGS NQLTRNDQVS 360 NQLMKNDQGS NQLMRIDEPN DEPNPKRRNT ETGPVTVPAD HSTSAHKVVS EPKIVVQTRS 420 EVDLLDDGFK WRKYGQKVVK GNTNPRSYYK CTFPGCNVRK HVERAPLDPK SVVTTYEGKH 480 NHDIPVSRHR GYNNNNGSGG AAARRKEPKL GNNERPVLLQ MKEEEITAVG RLYFVLINMI 540 PAQGGMGIHE HFPPGPWCCP FVGKMFHDHR IQALNNIKNH NDEDENNQHD NGECGRLSLL 600 SSEAENVAAG WPSWLCEVAA EAVRGWLPLK SDSYEKFEKI GQGTYSSVFR ARHAASGRMV 660 ALKKVRFDNL KPDSVKFMAR EITILRSLDH PNIMKLEGII TSQVSCIIYL VFEYMEHDLA 720 GLLSSPDIKF SHSQIKCYMR QLLNGIEHCH SRGVLHRDIK TANILVNNEG VLKIGDFGLA 780 KIYGPMSKEP LTSHVVTLWY RPPELLLGCT KYGTSVDLWS VGCVFAELFL GRPILKGRTE 840 VEQLHRIFKL CGTPPDDYWN KSKLPLATMF KPHHAYESTL HERCKDIPKT ALNLIETLLS 900 VDPCKRGTAG SALESEYFNT KPDVCDPASL PKYPPNKQIH SKARDEGHRK KPGGAVGASR 960 NPTRARKTYQ EHTSFSKVVP TEVNAESHVP KGSRDPVSAF VQLTEISESD GICALPTQTT 1020 ASNGGFVWAT RRRKHGGHLT QSSGSVTPRV LKTSASQRMP ENVESTSRVC GGFRNPASFD 1080 ISKVHNSQDL LNDDDESETF FDAHAE

Sequence ? help Back to Top

Protein Sequence Length: 1106 aa Download sequence

MTETNGGSPQ QQPRRQPPPM LSLPQKQQTS SFENIFTGGP SSGFSPGPMT LVSNYFSDHF  60
SDGSFSQLLA GAMNSPVSQI SSDDNKNISS RGFKDKRPMD LVISQSPTGF MFPNLFSPSG  120
LLNSPGFFSP LQSPLVSHQQ ALAHVTAQAA FSQSYFNNVQ PENYTGGLGT VVNEEETRMV  180
NANAELEDSQ IGSPDELSVS QSDVSESQHV ISGSADISDG YNWRKYGQKQ VKASEHPRSY  240
YKCTHPNCPV KKKVGQALDG HISDIVYKGK HNHDPPPPNK RGKDSADVNK LNNSQMETRV  300
AEQPVADQGF NQMMRNDQGF SQLMRNDQGF HQMARNDQGY NQLMENVQGS NQLTRNDQVS  360
NQLMKNDQGS NQLMRIDEPN DEPNPKRRNT ETGPVTVPAD HSTSAHKVVS EPKIVVQTRS  420
EVDLLDDGFK WRKYGQKVVK GNTNPRSYYK CTFPGCNVRK HVERAPLDPK SVVTTYEGKH  480
NHDIPVSRHR GYNNNNGSGG AAARRKEPKL GNNERPVLLQ MKEEEITAVG RLYFVLINMI  540
PAQGGMGIHE HFPPGPWCCP FVGKMFHDHR IQALNNIKNH NDEDENNQHD NGECGRLSLL  600
SSEAENVAAG WPSWLCEVAA EAVRGWLPLK SDSYEKFEKI GQGTYSSVFR ARHAASGRMV  660
ALKKVRFDNL KPDSVKFMAR EITILRSLDH PNIMKLEGII TSQVSCIIYL VFEYMEHDLA  720
GLLSSPDIKF SHSQIKCYMR QLLNGIEHCH SRGVLHRDIK TANILVNNEG VLKIGDFGLA  780
KIYGPMSKEP LTSHVVTLWY RPPELLLGCT KYGTSVDLWS VGCVFAELFL GRPILKGRTE  840
VEQLHRIFKL CGTPPDDYWN KSKLPLATMF KPHHAYESTL HERCKDIPKT ALNLIETLLS  900
VDPCKRGTAG SALESEYFNT KPDVCDPASL PKYPPNKQIH SKARDEGHRK KPGGAVGASR  960
NPTRARKTYQ EHTSFSKVVP TEVNAESHVP KGSRDPVSAF VQLTEISESD GICALPTQTT  1020
ASNGGFVWAT RRRKHGGHLT QSSGSVTPRV LKTSASQRMP ENVESTSRVC GGFRNPASFD  1080
ISKVHNSQDL LNDDDESETF FDAHAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G13960.1	2e-98	WRKY family protein