PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc012547.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | GATA | ||||||||
Protein Properties | Length: 245aa MW: 27189.7 Da PI: 7.9012 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.4 | 2.6e-20 | 118 | 152 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++ Cse_sc012547.1_g020.1 118 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 152 ********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MNRCTGSTMM GPCSCGLYHY QQNSFSSIFP MPYEQEMCPY GSSPSSVDCT LSLGTPSTRM 60 SSNDYEKTHS EKRRGSNWWN ILQSSSNSPT PSSQKASRGS SNGNGNGNGS DSLFSRRCAN 120 CDTTSTPLWR NGPRGPKSLC NACGIRYKKE ERRANAAAAA AVSTGGSDAS EGYHHHQYMM 180 NNNGNNQWVN DQYYSQSTYK MPSCYSPAAA SNEFRFMDHD MDDRDSPFLS WRLNVTDRPG 240 LVHDY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36620.1 | 3e-40 | GATA family protein |