PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012223.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 415aa    MW: 47297.9 Da    PI: 8.3872
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012223.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR121.67e-0710415890
                   FAR1 58 trtgCkaklkvkkekdgkwevtkleleHnHela 90
                            rt+Ckak+ v ++ ++k +v+++++eHnH ++
  Cse_sc012223.1_g020.1 10 FRTNCKAKIYVIRS-SEKHKVKNFVEEHNHGFF 41
                           59*********999.99*************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    
MYRDLRVLQF RTNCKAKIYV IRSSEKHKVK NFVEEHNHGF FTAEDRHLQR SHRSMSLAHQ  60
YFAIKASNLN IDPCMSFNFI AKLLGGYENV GATKIDFKNL SRDIYNYIGK YNAQMIIDKL  120
STLKERDENF TFEFKTNTDG PLSCLFWSDD TSKRNYEACG DVLSFDATFN EYESYLVLAD  180
QDPSMLIAIP DIFKTAKHRL CMWHIMNKLP TKAEIVISID SCTGSTKNLG FVKDTDKEWF  240
GEFKVDYDEE TRSVNYSYLH FKRCGLLCSH AFYTLRAYCI NKIPKQYLLR RWEKEAVVLP  300
PLGSFKANGS SGSCISKIYS KVNVVINHCG YDEEKLGISL EKLSIYEYGL ESSTVAQSSG  360
NKEHSISSMI GIPKPAAIDV FPPDIGSNKG GVTGARYKPS NNDVKFKDAK ECGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-18FAR1 family protein