PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012207.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 304aa    MW: 34449 Da    PI: 10.234
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012207.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.21.1e-30237294359
                            -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            D+y+WrKYGqK++kgs++pr+YYrC+s  gCp++k+ver+ +d  ++++tYeg+Hnh+
  Cse_sc012207.1_g050.1 237 DEYSWRKYGQKPIKGSPHPRGYYRCSSMrGCPARKHVERCLDDFGMLIVTYEGDHNHS 294
                            9************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MEEVELANKS AVKSFHEIIT LLSQPHDHFH HRKLIDLTSD VVMGFKRVAS LLDDKLSHPR  60
VRKSKNFKTR VPQNILLEKD NLSAPNVFKK NISLANQYPS SMQIPQNTHT SFANYQFLQH  120
QQKYQMEQQA KMMYRGSNGG YNLSFDSSVC TPSMSSNRSF VSSLSIEGSV SNISGSSSHL  180
VGSYGQDTYQ HKRRCSARGH DGSSGGKCHC SKKRRHRVKR SIKVPAISHK LADIPPDEYS  240
WRKYGQKPIK GSPHPRGYYR CSSMRGCPAR KHVERCLDDF GMLIVTYEGD HNHSLLLPSQ  300
SLNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04670.15e-82WRKY family protein