PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011683.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 757aa MW: 87603.8 Da PI: 8.4151

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011683.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63.1	8e-20	137	241	3	90
FAR1 3 YneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk................tekerrtraetrtgCkaklkvkkekd 73 Y++YA+e GF+vr+ +k+s ++++ + f+C ++g++ ++k + ++ +rr+ra+ r+gC+a+l++kk+ d Cse_sc011683.1_g030.1 137 YKNYAREGGFEVRRGGQKNSnDKKEDPSLKYFYCVRQGFKPTRKPEdsqtdktqktnplgatKVIKRRKRASCRCGCTAQLRLKKRPD 224 9***********98888845566678899****9999888899*******9989999***************** PP FAR1 74 gkwevtkleleHnHela 90 gk+ vtkl ++HnH+l+ Cse_sc011683.1_g030.1 225 GKYFVTKLIEKHNHSLV 241 ************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MNDFMDSPVP NHHVDDVEGE PLSPREIPIV AGEPSTPRAI HIGQDTYVEG YYTPPEHQVG 60 TFQPTPNGTK FWIPKTNNKI KDGDVFDTIE LALTAYKNYA REGGFEVRRG GQKNSNDKKE 120 DPSLKYFYCV RQALTAYKNY AREGGFEVRR GGQKNSNDKK EDPSLKYFYC VRQGFKPTRK 180 PEDSQTDKTQ KTNPLGATKV IKRRKRASCR CGCTAQLRLK KRPDGKYFVT KLIEKHNHSL 240 VYEDDIKYLR AARRLTFSKQ QLINKLSNVN IGPVKSWKVM KEMYGGFEYI GATDVECKNY 300 RRGLNDFIGG RDAQMVVDKL LSREEFLTDF SVKYKLDEKT KALVGLFWTD EQAKRNYEAF 360 GDVVSFDATF RSNRYNMVLV PFIGIDNHNI CIIFVAALLA TESAIRYTWL LKKFKKVFVK 420 VPKVVVTDQD PSMKIAIEEM LPDTRHRLCM WHIVQKLTTK VGPALCSNTD FRRRLCDIVW 480 TDQIEPNVFD EQWHTIIEDF DLGEHKWLHD MFEMRSKWIP AYFRNEPMSG LMRTTSRYKT 540 PDLKTHLQVE REAAELYTHT LFYDVQDEIW SSLYHCCSLS VQEDDTSYTY VICDTEADYK 600 INGVSVEVKY KVYHFPRKYL LRRWSKNALP NKSVRRQIDV ASSSNPVEFV NGVIREIYVS 660 VEDSVTRLVT DIQKLDIYKD DVAALLEQVK LDIPNAPEMN KNELYAAALG VKEPVEVNII 720 APRMSYCDTY GYHDSRNCPK KKADLDAQMS DTSNVQE

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MNDFMDSPVP NHHVDDVEGE PLSPREIPIV AGEPSTPRAI HIGQDTYVEG YYTPPEHQVG  60
TFQPTPNGTK FWIPKTNNKI KDGDVFDTIE LALTAYKNYA REGGFEVRRG GQKNSNDKKE  120
DPSLKYFYCV RQALTAYKNY AREGGFEVRR GGQKNSNDKK EDPSLKYFYC VRQGFKPTRK  180
PEDSQTDKTQ KTNPLGATKV IKRRKRASCR CGCTAQLRLK KRPDGKYFVT KLIEKHNHSL  240
VYEDDIKYLR AARRLTFSKQ QLINKLSNVN IGPVKSWKVM KEMYGGFEYI GATDVECKNY  300
RRGLNDFIGG RDAQMVVDKL LSREEFLTDF SVKYKLDEKT KALVGLFWTD EQAKRNYEAF  360
GDVVSFDATF RSNRYNMVLV PFIGIDNHNI CIIFVAALLA TESAIRYTWL LKKFKKVFVK  420
VPKVVVTDQD PSMKIAIEEM LPDTRHRLCM WHIVQKLTTK VGPALCSNTD FRRRLCDIVW  480
TDQIEPNVFD EQWHTIIEDF DLGEHKWLHD MFEMRSKWIP AYFRNEPMSG LMRTTSRYKT  540
PDLKTHLQVE REAAELYTHT LFYDVQDEIW SSLYHCCSLS VQEDDTSYTY VICDTEADYK  600
INGVSVEVKY KVYHFPRKYL LRRWSKNALP NKSVRRQIDV ASSSNPVEFV NGVIREIYVS  660
VEDSVTRLVT DIQKLDIYKD DVAALLEQVK LDIPNAPEMN KNELYAAALG VKEPVEVNII  720
APRMSYCDTY GYHDSRNCPK KKADLDAQMS DTSNVQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-54	FAR1 family protein