PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011663.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 800aa MW: 92220.9 Da PI: 6.0739

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011663.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.2	2.7e-18	168	262	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr ++++ g +++++f Cskeg+++ + k+ +++ +r r++ rt+Ckak+ v ++ +k++v++ Cse_sc011663.1_g010.1 168 AYKDYAVEAGFIVRGGHQTND--GGIVINKEFLCSKEGTKKVKVKEfdslkyncdAKSVKRIRSQFRTNCKAKIYVVRS-AEKYRVKS 252 5************998777..999***************9****98999999**********999.9*** PP FAR1 81 leleHnHela 90 +++eHnH ++ Cse_sc011663.1_g010.1 253 FVEEHNHGFF 262 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MASCLPHSVE DMQMYVKKQC EEDDVARKNA IIDVINLFEQ ARAEKQRMRE DYTICNDITL 60 ERKAVIEKFL MDEDSKDDNI SDILWVCVQQ IQNNINTKIS DSMRQNCASN EFVEDENLSA 120 DVNVEENEEV NSPDFFTSTS MLIKPVVVKT LVPVEGTLFD SVEEAYKAYK DYAVEAGFIV 180 RGGHQTNDGG IVINKEFLCS KEGTKKVKVK EFDSLKYNCD AKSVKRIRSQ FRTNCKAKIY 240 VVRSAEKYRV KSFVEEHNHG FFTAEDRHLQ KSHSIFSNLN IGPCMSFNFI AELLGGYENV 300 GATKIDFKNM SRDIYSYIGK YDAQMIIDKF SILKERDENF TFEFKTNTDG QLSCLFWSDD 360 TSKRNYEAFG DVLSFDATYK TNMYNMVFVP FTGVDNHQKC VIFSCGLLSK EDVVSYKWLL 420 QAFLNTHIKE PYLVLTDQDP SMLIAIPDMF KIAKHRLCMW HIMNKLPTKI GSSICEEGGF 480 KKRLCSLVWR ESDKPVKFVQ KWEALLDEFD LDKHKCLNDM FNIKELWIPA YFRDIPMSGL 540 MKTTSRSESE NYFFDHNSNW SYTLVHFLFR YESALDQQRN NQRVLDNNSR INRPSLKTNH 600 LVEQHAAEFY TLEAFYVVQA EIVASIESCT GSMKNLGYVK DIDKEWFGEF KVDYDEGTRS 660 VNCSCLHFER RGLLCRHAFY TLRAYGINKI PKQYLLRRWK KEAVVLPLLG SSFKENGSSG 720 SCISKIYSKV NSIINHCGYD EEKLGIFFER LSIYESGFES STVAQSSVNK EDSISSMIGI 780 PKPAALDVFP PDIGSIFPPQ

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MASCLPHSVE DMQMYVKKQC EEDDVARKNA IIDVINLFEQ ARAEKQRMRE DYTICNDITL  60
ERKAVIEKFL MDEDSKDDNI SDILWVCVQQ IQNNINTKIS DSMRQNCASN EFVEDENLSA  120
DVNVEENEEV NSPDFFTSTS MLIKPVVVKT LVPVEGTLFD SVEEAYKAYK DYAVEAGFIV  180
RGGHQTNDGG IVINKEFLCS KEGTKKVKVK EFDSLKYNCD AKSVKRIRSQ FRTNCKAKIY  240
VVRSAEKYRV KSFVEEHNHG FFTAEDRHLQ KSHSIFSNLN IGPCMSFNFI AELLGGYENV  300
GATKIDFKNM SRDIYSYIGK YDAQMIIDKF SILKERDENF TFEFKTNTDG QLSCLFWSDD  360
TSKRNYEAFG DVLSFDATYK TNMYNMVFVP FTGVDNHQKC VIFSCGLLSK EDVVSYKWLL  420
QAFLNTHIKE PYLVLTDQDP SMLIAIPDMF KIAKHRLCMW HIMNKLPTKI GSSICEEGGF  480
KKRLCSLVWR ESDKPVKFVQ KWEALLDEFD LDKHKCLNDM FNIKELWIPA YFRDIPMSGL  540
MKTTSRSESE NYFFDHNSNW SYTLVHFLFR YESALDQQRN NQRVLDNNSR INRPSLKTNH  600
LVEQHAAEFY TLEAFYVVQA EIVASIESCT GSMKNLGYVK DIDKEWFGEF KVDYDEGTRS  660
VNCSCLHFER RGLLCRHAFY TLRAYGINKI PKQYLLRRWK KEAVVLPLLG SSFKENGSSG  720
SCISKIYSKV NSIINHCGYD EEKLGIFFER LSIYESGFES STVAQSSVNK EDSISSMIGI  780
PKPAALDVFP PDIGSIFPPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-76	FAR1 family protein