PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011584.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 494aa MW: 57319 Da PI: 7.8276

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011584.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	22.9	2.4e-07	246	285	87	127
NAM 87 gkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 k+ ++s +g +vg k++Lv+y+ a++ +k++W+mhey+ Cse_sc011584.1_g030.1 246 TKKDYIVSDdaSGLKVGKKRSLVYYD--ASN-KKSQWLMHEYT 285 444455554556778********3..333.68******7 PP
2	NAM	88.4	1.3e-27	361	484	2	126
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatgk 88 G+rF Pt +e++v+yL++++e+ + + + +d y P +L +++++ e++wyf ++rd++y++g+r+nr tk g+Wka+ + Cse_sc011584.1_g030.1 361 KHGYRFCPTHSEIIVHYLQPNIETGEQHPKCRYYIADFYGDTPDNLAANHRHCENKWYFLTSRDRNYPNGNRPNRRTKnFGFWKASTS 448 68*******************99976644477779*****987788899****************55538**** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmhey 126 dk v++ +ge vg k+L++y++ +kt W+mhey Cse_sc011584.1_g030.1 449 DKVVCDDvTGEIVGRMKSLAYYDK---YKRKTPWLMHEY 484 99889999******43...3358****** PP

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence
MTSIHFKSSH LALKEYNNAL DVNSLNSGEH TFEKMVSGMY LGEILHRVLY WMANKAPLFG 60 QTEAQLDNDY YVVCRTPEMS VTHHDSSPSF GLTNTIMTYQ VRQKRTYAIC LPKLIDIALG 120 VLDENARINI LNVLTQNLKL EGAFKLMKIS RSTPGFVGAD LAALVNKADR WRKTWTPEEM 180 EKLSIRMSDL EVAAKLVQPS SKREGFLSNP NVKWEDVGGL DQLRREFNRY IVRHITILAF 240 RKEVTTKKDY IVSDDASGLK VGKKRSLVYY DASNKKSQWL MHEYTTINPN ILVGSIEDKM 300 KLTHWVLCEI YKKKKDDSEQ EVLKVQSTYQ DNQSIESNED NFCFIEEEAS ELLNDYADSL 360 KHGYRFCPTH SEIIVHYLQP NIETGEQHPK CRYYIADFYG DTPDNLAANH RHCENKWYFL 420 TSRDRNYPNG NRPNRRTKNF GFWKASTSDK VVCDDVTGEI VGRMKSLAYY DKYKRKTPWL 480 MHEYINNNPQ LEAE

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence

MTSIHFKSSH LALKEYNNAL DVNSLNSGEH TFEKMVSGMY LGEILHRVLY WMANKAPLFG  60
QTEAQLDNDY YVVCRTPEMS VTHHDSSPSF GLTNTIMTYQ VRQKRTYAIC LPKLIDIALG  120
VLDENARINI LNVLTQNLKL EGAFKLMKIS RSTPGFVGAD LAALVNKADR WRKTWTPEEM  180
EKLSIRMSDL EVAAKLVQPS SKREGFLSNP NVKWEDVGGL DQLRREFNRY IVRHITILAF  240
RKEVTTKKDY IVSDDASGLK VGKKRSLVYY DASNKKSQWL MHEYTTINPN ILVGSIEDKM  300
KLTHWVLCEI YKKKKDDSEQ EVLKVQSTYQ DNQSIESNED NFCFIEEEAS ELLNDYADSL  360
KHGYRFCPTH SEIIVHYLQP NIETGEQHPK CRYYIADFYG DTPDNLAANH RHCENKWYFL  420
TSRDRNYPNG NRPNRRTKNF GFWKASTSDK VVCDDVTGEI VGRMKSLAYY DKYKRKTPWL  480
MHEYINNNPQ LEAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	4e-11	NAC family protein