PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011528.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 1162aa MW: 131222 Da PI: 6.9676

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011528.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	20.7	7e-07	241	274	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + Cse_sc011528.1_g020.1 241 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 274 469*****************************87 PP
2	ELK	22.9	2e-08	195	216	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ Cse_sc011528.1_g020.1 195 ELKIELKQGFRSKIEDVREEIL 216 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1162 aa Download sequence
MQEQQQQQMM SGFSDHISLS GDANNRHIKA EIANHPLYEQ LLSAHVACLR VATPIDQLPL 60 IDAQLSQSHH LLRSYISDHH NQPLSPHDRQ ELDNFLAQYL LVLCSFKEQL QQHVRVHAVE 120 AVMACREIEH NLQALTGVTL GEGSGATMSD DEDEMPMDFS LDQSGGIDGS HDMMGFGPLL 180 PTESERSLME RVRQELKIEL KQGFRSKIED VREEILRKRR AGKLPGDTTS VLKDWWQQHA 240 KWPYPTEDDK AKLVEETGLQ LKQINNWFIN QRKRNWHSNS NSMTALKSKR KRAKMAGSSD 300 EGSRHPQRVE VVPFNTSEVP LKTVLLHGNL DICVKEANKL PNMDAFNKKF TTLSGTSDPY 360 VTVSVANAVI GRTFVINNSE NPVWMQHFYV PVAHYTTEVL FVVKDSDVVG SQLIGAVGIP 420 AELLVNNSVV KGTFPILNAS GQPCKPDAIL SLSIKYTPVN QIDMYNDGVG SDSEFKGVPG 480 TYFPLRRGGK VTLYQDAHVD GSLPTIKLDR GLKYVQGDCW RDICDAIRQA RRLIYITGWS 540 IYHKVQLVRY GAKARDSILG DLLKSKAEEG VRVLLLVWDD PTSKSFLGYK TEGVMQTHDE 600 ETRAFFKNSS VQVLLCPRSL AKTSWTKKDA ETIYSHHQKT VIVDADAGIK RRIMAFVGGL 660 DLCTGRYDTP EHSLFSTLKT LHKDDYHNPN YTGPTAGCPR EPWHDLHCRL EGPAAYDVLQ 720 NFEERWLRAS KPCGLSKVTR YFDVLLNLDR IPEILGITDA RYTSEKDPEG WHVQVFRSID 780 SNSVKGLGFP KDPKDATSKG LVCGKNVLID MSIHTAYVKA IRTAQHFIYI ENQYFLGSSY 840 NWDNHKSLGA NNLIPMEIAL KIANKIRANE RFAVYIVIPM WPEGNPTNSA TQRILLWQHH 900 TMQMMYDVIY KALQEMGLEN EREPQDYLNF FCLGTRESSS QVTQPTTNGK VSVAPNTPQA 960 LSIASRRFMI HVNSKGMIVD DEFVILGSAN INQRSLEGTR DTEIAMGAYQ PHHTWARKGS 1020 APRGQIYGYR MSLWAEHVGQ LESTFDQPES LECVKRVRSL GEKNWEQYAS DKVTDMTAHL 1080 LKYPVEVDCK GQVKPLPGCP NFPDVGGSIV DIWIQDVRMS LWAEHVGQLE STFDQPESLE 1140 CVKRVRSLGE KNWEQYAADK VI

Sequence ? help Back to Top

Protein Sequence Length: 1162 aa Download sequence

MQEQQQQQMM SGFSDHISLS GDANNRHIKA EIANHPLYEQ LLSAHVACLR VATPIDQLPL  60
IDAQLSQSHH LLRSYISDHH NQPLSPHDRQ ELDNFLAQYL LVLCSFKEQL QQHVRVHAVE  120
AVMACREIEH NLQALTGVTL GEGSGATMSD DEDEMPMDFS LDQSGGIDGS HDMMGFGPLL  180
PTESERSLME RVRQELKIEL KQGFRSKIED VREEILRKRR AGKLPGDTTS VLKDWWQQHA  240
KWPYPTEDDK AKLVEETGLQ LKQINNWFIN QRKRNWHSNS NSMTALKSKR KRAKMAGSSD  300
EGSRHPQRVE VVPFNTSEVP LKTVLLHGNL DICVKEANKL PNMDAFNKKF TTLSGTSDPY  360
VTVSVANAVI GRTFVINNSE NPVWMQHFYV PVAHYTTEVL FVVKDSDVVG SQLIGAVGIP  420
AELLVNNSVV KGTFPILNAS GQPCKPDAIL SLSIKYTPVN QIDMYNDGVG SDSEFKGVPG  480
TYFPLRRGGK VTLYQDAHVD GSLPTIKLDR GLKYVQGDCW RDICDAIRQA RRLIYITGWS  540
IYHKVQLVRY GAKARDSILG DLLKSKAEEG VRVLLLVWDD PTSKSFLGYK TEGVMQTHDE  600
ETRAFFKNSS VQVLLCPRSL AKTSWTKKDA ETIYSHHQKT VIVDADAGIK RRIMAFVGGL  660
DLCTGRYDTP EHSLFSTLKT LHKDDYHNPN YTGPTAGCPR EPWHDLHCRL EGPAAYDVLQ  720
NFEERWLRAS KPCGLSKVTR YFDVLLNLDR IPEILGITDA RYTSEKDPEG WHVQVFRSID  780
SNSVKGLGFP KDPKDATSKG LVCGKNVLID MSIHTAYVKA IRTAQHFIYI ENQYFLGSSY  840
NWDNHKSLGA NNLIPMEIAL KIANKIRANE RFAVYIVIPM WPEGNPTNSA TQRILLWQHH  900
TMQMMYDVIY KALQEMGLEN EREPQDYLNF FCLGTRESSS QVTQPTTNGK VSVAPNTPQA  960
LSIASRRFMI HVNSKGMIVD DEFVILGSAN INQRSLEGTR DTEIAMGAYQ PHHTWARKGS  1020
APRGQIYGYR MSLWAEHVGQ LESTFDQPES LECVKRVRSL GEKNWEQYAS DKVTDMTAHL  1080
LKYPVEVDCK GQVKPLPGCP NFPDVGGSIV DIWIQDVRMS LWAEHVGQLE STFDQPESLE  1140
CVKRVRSLGE KNWEQYAADK VI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	272	292	RKRNWHSNSNSMTALKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-156	TALE family protein