PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011482.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 313aa MW: 34136.7 Da PI: 9.7857

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011482.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	99.9	1.5e-31	242	299	3	59
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYeg+Hnh Cse_sc011482.1_g020.1 242 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDPSMLIVTYEGDHNHA 299 99**********************988**************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MAVDLIMSTT TEHNAVQEAA SGLESVQKLI RLLSHQQSQQ VAPDEYQAVA DMAVNKFKRV 60 ISLLGRTNRE LTGHARFRRA PPVNSNNDNN NCNIVSIRNS EQDDVVSDES ETKVYNPTPI 120 QQVPFVPPPP VMQPAPAMFQ RKDSLPKTIS FSYSPAVSRA SSFMSSLTGD SDGKQVSAGG 180 KPPLCSASCV KRKCSSSENG GSGKCSGGSS GRCQCSKRRK LRMKRVVRVK AISMKLADIP 240 PDDYSWRKYG QKPIKGSPHP RGYYKCSSVR GCPARKHVER ALDDPSMLIV TYEGDHNHAL 300 SIAEASGLIL ESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24240.1	9e-66	WRKY family protein