PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011467.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

CO-like

Protein Properties

Length: 436aa MW: 48693.3 Da PI: 5.7492

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011467.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.8	8e-07	53	98	2	41
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 + ++C+ + + +++ C +++ lC+dC +H g H++++ Cse_sc011467.1_g010.1 53 RSQICDGCRSAPVSVRCSTDNLVLCRDCDWDTH-GacsvsaaHDRTS 98 5689*****************************.5578888887765 PP
2	CCT	64.8	2.6e-22	387	430	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R a+lRYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk++ Cse_sc011467.1_g010.1 387 RGDAMLRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAN 430 6789*************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MSPQANNPGD DIPCDYCNHH IAVIFCRADS AKLCLFCDQH VHAANALSSK HHRSQICDGC 60 RSAPVSVRCS TDNLVLCRDC DWDTHGACSV SAAHDRTSVD GFTGCPSPLD LAVAWGLDIL 120 NHKKKPISNM LKSSDLDPGR VSGHGWVLDP DPYLQEELMV PDESFDENGF SCGKQKNVIM 180 KQLTEIYKRS LLLCDGDNED DDVPRQQVKG DDVENEVRDE HQPFTSLLMM QGPLDVDLMK 240 DGRNSERDMG WESKPKEHRR TQIWDFNMGR LASPEESDAV DSAGYGTNNE GFMMKTFSEI 300 LSEASMPNKT GLGDMYGINY STSHTDIVAL NLNIPNSSNE RKTTSAFGTS GYGGSNDIQF 360 TEQNLTTADK MAPSLTKADM ELLAKNRGDA MLRYKEKKKT RRYDKHIRYE SRKARADTRK 420 RVKGRFVKAN NEDGDC

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MSPQANNPGD DIPCDYCNHH IAVIFCRADS AKLCLFCDQH VHAANALSSK HHRSQICDGC  60
RSAPVSVRCS TDNLVLCRDC DWDTHGACSV SAAHDRTSVD GFTGCPSPLD LAVAWGLDIL  120
NHKKKPISNM LKSSDLDPGR VSGHGWVLDP DPYLQEELMV PDESFDENGF SCGKQKNVIM  180
KQLTEIYKRS LLLCDGDNED DDVPRQQVKG DDVENEVRDE HQPFTSLLMM QGPLDVDLMK  240
DGRNSERDMG WESKPKEHRR TQIWDFNMGR LASPEESDAV DSAGYGTNNE GFMMKTFSEI  300
LSEASMPNKT GLGDMYGINY STSHTDIVAL NLNIPNSSNE RKTTSAFGTS GYGGSNDIQF  360
TEQNLTTADK MAPSLTKADM ELLAKNRGDA MLRYKEKKKT RRYDKHIRYE SRKARADTRK  420
RVKGRFVKAN NEDGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28050.1	1e-98	CO-like family protein