PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011327.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 581aa MW: 62176.5 Da PI: 6.2887

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011327.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97	1.3e-30	307	365	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Cse_sc011327.1_g010.1 307 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCAEDRTILITTYEGTHNHP 365 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MASGLSFDSD PIHTPPPPSD HHRLTTATWT IMDTNTNTSS SPPPSTTIHF PLTLSSNNNH 60 DDRRTLNEMD FFANNKKHEE DCTRLNDHPS HDDHVMELES NVNTGLHLVT GNTSSDQSIV 120 EDGLSPNSDD KRAKNELALV QAELERMNME NKKLKEVLNQ VTVNYNTLQS HLVTIMQEKE 180 RSGSISDDRK TIHDGGGGGD QQMMVPLMDL GLSAPTAIET DENSQSSSEH DENSRSPPIH 240 NNNNKMIVQG DESPEQASQG VKVGSNKVPR LTASKTNTST SIDQATEATI RKARVSVRAR 300 SEAPMIADGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTILITTYEG 360 THNHPLPPAA MAMASTTSSA ARMLLSGSMP SSDGLINSNF LARTFLSCSS SMATISASAP 420 FPTVSLDLTQ SPNPLQQLQR GGGQFQPSFP AFQHQNFTGQ NAALLPQIFG QALYNQSKFS 480 GLQMSQDMEA GGSSQLGLSP LHNQGASPAA LADTVTALTS DPNFSAALAA AISSVLGGGG 540 TNANNGNVNA TTSNNHNGSA PTSNNNTNGN NKVNSSGFQG N

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MASGLSFDSD PIHTPPPPSD HHRLTTATWT IMDTNTNTSS SPPPSTTIHF PLTLSSNNNH  60
DDRRTLNEMD FFANNKKHEE DCTRLNDHPS HDDHVMELES NVNTGLHLVT GNTSSDQSIV  120
EDGLSPNSDD KRAKNELALV QAELERMNME NKKLKEVLNQ VTVNYNTLQS HLVTIMQEKE  180
RSGSISDDRK TIHDGGGGGD QQMMVPLMDL GLSAPTAIET DENSQSSSEH DENSRSPPIH  240
NNNNKMIVQG DESPEQASQG VKVGSNKVPR LTASKTNTST SIDQATEATI RKARVSVRAR  300
SEAPMIADGC QWRKYGQKMA KGNPCPRAYY RCTMAAGCPV RKQVQRCAED RTILITTYEG  360
THNHPLPPAA MAMASTTSSA ARMLLSGSMP SSDGLINSNF LARTFLSCSS SMATISASAP  420
FPTVSLDLTQ SPNPLQQLQR GGGQFQPSFP AFQHQNFTGQ NAALLPQIFG QALYNQSKFS  480
GLQMSQDMEA GGSSQLGLSP LHNQGASPAA LADTVTALTS DPNFSAALAA AISSVLGGGG  540
TNANNGNVNA TTSNNHNGSA PTSNNNTNGN NKVNSSGFQG N

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-110	WRKY family protein