PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011020.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 325aa MW: 36531.2 Da PI: 6.6519

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011020.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.3	6.6e-33	177	234	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+ Cse_sc011020.1_g050.1 177 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPSTVITTYEGQHNHH 234 8********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence
MSQDQRDLYY HDPFHDDQRT SETLFSFFGP NSGIRDESSP PNHQRFQDYM GLTHFFNNGS 60 SDYNSPATTF GYTSSSSQQV FALQDDQKPI MDHGNLVGAS EMTPVTPNSS SILSSSTEAP 120 DDEPELNEGK KENQQKGVLE DGGESSKKVA KQKKKDEKKP REPRFAFMTK SDIDHLEDGY 180 RWRKYGQKAV KNSPYPRSYY RCTTQKCTVK KRVERSYQDP STVITTYEGQ HNHHLPATLR 240 GNVGGMLYPQ SMLAAQSAMM ASGGSSFSHE FLSQIPHGFY NPNGGASSGS IYQQTSLAPM 300 HQQLQIPDYG LLQDMVPSMT FKQEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G29860.1	2e-52	WRKY family protein