PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010987.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 316aa MW: 36231.6 Da PI: 6.6686

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010987.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	70.4	2.6e-22	128	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ +s++ rsYYrCt++ gC ++k+v++ ++ p+ +++Y g+H+++ Cse_sc010987.1_g030.1 128 VDDGHAWRKYGQKKILNSKHQRSYYRCTYKfdqGCLATKQVQQIQDSPSKYKTIYCGDHTCK 189 59*************************9999*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MESSSWPERL PSNRIQAIQT LTEGQEMINI LCEMLLWPEE IDSGPISDGL VARIQGMFEN 60 TLSIMRSCSS NEPIQLMKSD VHPPCDSDEE KSKYSDIHKK ITAPKIKRGG YKRSKNTWTS 120 TQIASVLVDD GHAWRKYGQK KILNSKHQRS YYRCTYKFDQ GCLATKQVQQ IQDSPSKYKT 180 IYCGDHTCKN LQRAPTIVLD FPEPRDTSIH LSFEKKGYVE NKHVEPNFPS VEQELKEGFP 240 FSGSLRHNEP SFSNNYLSVE QNTYDSRRPL EPTISMTPFG YGDIISSNAY SYTANTPGHG 300 LHERNDFDDF PYELCF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	3e-36	WRKY family protein