PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc010834.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 125aa MW: 14328.1 Da PI: 10.7712 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.9 | 4e-07 | 63 | 117 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT......-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg......tWktIartmg....kgRtlkqcksrwqky 47 +WT+ E++ l+++v+++ ++ W++I Rt+ ++k++w++ Cse_sc010834.1_g020.1 63 PWTQSEEDTLKELVAKFVSDgntgrfPWSRILDLGAtifqSSRTPVDLKDKWRNM 117 8*****************99***********9877799999************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 125 aa Download sequence |
MDQDSGGEDG NDNKKGKREK KKVTGRDNDA AERSGDFQMR RRHHAFPVSP SLQVPERRRV 60 LVPWTQSEED TLKELVAKFV SDGNTGRFPW SRILDLGATI FQSSRTPVDL KDKWRNMQKA 120 SKKSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17460.2 | 3e-08 | MYB_related family protein |