PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010829.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 337aa    MW: 37510.3 Da    PI: 8.6552
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010829.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53e-132771348
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +W++e+d +l + +  +G+++W+ Ia+++  g+t  qc+ rw++yl
  Cse_sc010829.1_g010.1 27 SWSKEDDAILREQIGIHGTNNWAIIASKFE-GKTTRQCRRRWFTYL 71
                           6*****************************.*************97 PP
2Myb_DNA-binding46.58.7e-1577118144
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 
                            +g WT+eEd ll +a k++G++ W+ Ia+ +  gRt++ +k+r+
  Cse_sc010829.1_g010.1  77 KGGWTPEEDTLLCEAQKMFGNR-WTEIAKVVS-GRTDNAVKNRF 118
                            688*******************.*********.**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MSNMKKKDCD SSSVSDNVKQ KERHIVSWSK EDDAILREQI GIHGTNNWAI IASKFEGKTT  60
RQCRRRWFTY LNSDCKKGGW TPEEDTLLCE AQKMFGNRWT EIAKVVSGRT DNAVKNRFSV  120
LSKRRAKQEA SNKENNAADV NTNKRQITNG ILETSMHPMK TRRKHIAATV EDCKLEQGSV  180
GESSSSRNEE PRPPLVVLVQ NFHNINTKAP IDASRGNMVE GSVLKKNDTK MVEPPSSELI  240
HPTNLVDAAT NQDIIPSCNE HNNDAGGVCP LPNSEFNSPL QITPFFTSMA QGIPSPQFSE  300
SEKTFLLKTL GMELTPPNTT TGTSQSPPCK RALLHCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14350.14e-65MYB family protein