PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010635.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 672aa MW: 74536.7 Da PI: 7.59

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010635.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.1	1.7e-09	496	528	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yps +++ LA+++gLt +qV++WF N R + Cse_sc010635.1_g010.1 496 HPYPSDADKHMLASQTGLTRNQVSNWFINARVR 528 89*****************************88 PP
2	BELL	104.7	6.1e-34	344	412	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 e ++kkakLl ++eeV++rYkqy++q+q+vissFe+vagl +a+pY+slAlk +SrhF +k+ai+eq+ Cse_sc010635.1_g010.1 344 EFHQKKAKLLYMQEEVCRRYKQYHQQMQMVISSFETVAGLTTATPYVSLALKSVSRHFHFVKNAISEQL 412 789****************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MDMNNMRNES HVAQKNRRHK LRFQQTNDDP THHQHVPDNL RYGSISYDPN VFPSEMLNSI 60 ASNPHLLLPP NHVYVDQDTG SGSVSGSGTD RVSGKVVGDN SQAVGSWKSV VSSQNQVQVS 120 NDWNVISYVN SNSNSKACYG YSQDMESHSL GEQKNPGEVP GFSGSPFYQN TLQDVVTTAT 180 IGSNVHQSVP IWMNGSDQVG FIGSRNNGNN CVTQRLSLSL SSVPQPKSEY PNAYSGPRVN 240 SDPRQFTGIS SFAHRSVGPL GPFTGYATIL KNSKYLKPAQ ELLNDSCDVG GQGLVPACDD 300 THKILEEELS RVSGESGASS STIYGSNEHL TGRSSSLSES CRPEFHQKKA KLLYMQEEVC 360 RRYKQYHQQM QMVISSFETV AGLTTATPYV SLALKSVSRH FHFVKNAISE QLTQMKKTFD 420 DMCSPTVGAS SSKTLDGNTT DSLSQLKSMD YFQRHGKSSG GPGFFGNQQP VWRPQRGLPE 480 RAVSVLKAWL FDHFLHPYPS DADKHMLASQ TGLTRNQVSN WFINARVRIW KPMVEEIHTL 540 ETKGLADSNS NNPQIDAKEI SQMDMSSLTN KQQPECSRTS GTLKTQNETS VPQWDPEKQP 600 RPDYHQIPPA TLDRSFTHLI PYTRTTFEAG GVGPVSLTLG LRQNAEHVQQ LQQHEHQLRQ 660 RFGGQLIHDF AG

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MDMNNMRNES HVAQKNRRHK LRFQQTNDDP THHQHVPDNL RYGSISYDPN VFPSEMLNSI  60
ASNPHLLLPP NHVYVDQDTG SGSVSGSGTD RVSGKVVGDN SQAVGSWKSV VSSQNQVQVS  120
NDWNVISYVN SNSNSKACYG YSQDMESHSL GEQKNPGEVP GFSGSPFYQN TLQDVVTTAT  180
IGSNVHQSVP IWMNGSDQVG FIGSRNNGNN CVTQRLSLSL SSVPQPKSEY PNAYSGPRVN  240
SDPRQFTGIS SFAHRSVGPL GPFTGYATIL KNSKYLKPAQ ELLNDSCDVG GQGLVPACDD  300
THKILEEELS RVSGESGASS STIYGSNEHL TGRSSSLSES CRPEFHQKKA KLLYMQEEVC  360
RRYKQYHQQM QMVISSFETV AGLTTATPYV SLALKSVSRH FHFVKNAISE QLTQMKKTFD  420
DMCSPTVGAS SSKTLDGNTT DSLSQLKSMD YFQRHGKSSG GPGFFGNQQP VWRPQRGLPE  480
RAVSVLKAWL FDHFLHPYPS DADKHMLASQ TGLTRNQVSN WFINARVRIW KPMVEEIHTL  540
ETKGLADSNS NNPQIDAKEI SQMDMSSLTN KQQPECSRTS GTLKTQNETS VPQWDPEKQP  600
RPDYHQIPPA TLDRSFTHLI PYTRTTFEAG GVGPVSLTLG LRQNAEHVQQ LQQHEHQLRQ  660
RFGGQLIHDF AG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27990.1	2e-85	TALE family protein