PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010607.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 355aa MW: 40027.9 Da PI: 9.9269

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010607.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102	3.9e-32	218	271	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Cse_sc010607.1_g010.1 218 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLSHVKSHLQMYRT 271 9****************************************************7 PP
2	Myb_DNA-binding	48.6	1.9e-15	219	270	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Cse_sc010607.1_g010.1 219 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLSHVKSHLQMYR 270 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MELFPAQPDL SLQISPPNTK PTSKTWRTSS TPSNQDNNHD SDLGNLWKRA FNSQQLHHHH 60 HHQQQQQQQH QQQHGSTRRS EPSFGLGLSN PGSTHSTNPD LTHYRNLLAQ NTNPTSSSAA 120 DIYPYQQQQH HQNHHQGFSS DLGFLRPIRG IPVYYQNTPP NFPILAHPHH KNNHSLLDHS 180 CSNSATTSSI IHGNNINNIV RSRFLSSRFP SKRSMRAPRM RWTTTLHARF VHAVELLGGH 240 ERATPKSVLE LMDVKDLTLS HVKSHLQMYR TVKTTDRAPA SSGQSDMYEN GSSGDNSDDI 300 MLDIRNPRTT EISAENGGRS SANQDKDYHY GLWSNSSSSS SPKKPNLEFT LGRSQ

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MELFPAQPDL SLQISPPNTK PTSKTWRTSS TPSNQDNNHD SDLGNLWKRA FNSQQLHHHH  60
HHQQQQQQQH QQQHGSTRRS EPSFGLGLSN PGSTHSTNPD LTHYRNLLAQ NTNPTSSSAA  120
DIYPYQQQQH HQNHHQGFSS DLGFLRPIRG IPVYYQNTPP NFPILAHPHH KNNHSLLDHS  180
CSNSATTSSI IHGNNINNIV RSRFLSSRFP SKRSMRAPRM RWTTTLHARF VHAVELLGGH  240
ERATPKSVLE LMDVKDLTLS HVKSHLQMYR TVKTTDRAPA SSGQSDMYEN GSSGDNSDDI  300
MLDIRNPRTT EISAENGGRS SANQDKDYHY GLWSNSSSSS SPKKPNLEFT LGRSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-57	G2-like family protein